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CAZyme Information: MGYG000002914_01225

You are here: Home > Sequence: MGYG000002914_01225

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parolsenella sp900552935
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Parolsenella; Parolsenella sp900552935
CAZyme ID MGYG000002914_01225
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
598 65530.3 5.028
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002914 1503585 MAG United States North America
Gene Location Start: 204;  End: 2000  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002914_01225.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 266 355 7.1e-18 0.4574468085106383

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 1.58e-22 303 392 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 2.72e-16 266 344 12 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 5.43e-13 281 402 724 834
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
cd00161 RICIN 8.71e-10 267 404 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
cd00161 RICIN 7.20e-09 265 355 42 123
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWT17570.1 1.21e-42 397 592 305 496
BAQ97096.1 1.12e-37 412 594 765 952
QWQ36867.1 7.46e-36 412 592 52 230
QGH70068.1 4.86e-35 407 592 282 458
QQT89323.1 2.27e-34 412 592 331 503

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6CRV0 5.56e-09 404 568 1266 1435
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
Q06852 1.78e-08 445 596 2111 2267
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999521 0.000500 0.000009 0.000002 0.000001 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002914_01225.