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CAZyme Information: MGYG000002954_00527

You are here: Home > Sequence: MGYG000002954_00527

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1191 sp900543485
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Anaerovoracaceae; UBA1191; UBA1191 sp900543485
CAZyme ID MGYG000002954_00527
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 52477.55 5.3433
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002954 2474898 MAG United States North America
Gene Location Start: 108259;  End: 109659  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002954_00527.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 196 447 6.6e-43 0.7353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.19e-12 222 419 246 458
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.11e-09 217 447 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 5.81e-04 223 380 186 330
Probable polygalacturonase
PLN03010 PLN03010 0.008 215 291 158 236
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU95271.1 7.56e-282 1 466 1 467
QUT22798.1 3.22e-274 1 466 1 468
QUT82465.1 4.58e-274 1 431 1 431
QDM08610.1 4.58e-274 1 431 1 431
QDH55097.1 2.64e-273 1 431 1 431

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.93e-09 203 454 180 421
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBR6 8.38e-09 213 445 250 456
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
B8MW78 4.17e-06 221 445 267 478
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1
Q2UT29 4.17e-06 221 445 267 478
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000552 0.998500 0.000321 0.000196 0.000197 0.000187

TMHMM  Annotations      download full data without filtering help

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