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CAZyme Information: MGYG000003132_01032

You are here: Home > Sequence: MGYG000003132_01032

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas sp900556485
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas sp900556485
CAZyme ID MGYG000003132_01032
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
503 MGYG000003132_4|CGC5 55816.55 6.6436
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003132 2983269 MAG United States North America
Gene Location Start: 136853;  End: 138364  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003132_01032.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 47 404 1.6e-56 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.10e-48 21 410 81 488
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 4.62e-15 7 414 30 390
polygalacturonase
PLN03003 PLN03003 1.28e-13 1 327 2 326
Probable polygalacturonase At3g15720
PLN02188 PLN02188 1.76e-12 1 329 1 345
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 4.25e-12 173 376 88 279
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMJ66331.1 5.69e-124 20 498 20 503
AMR25945.1 4.25e-122 20 491 19 497
AWM31556.1 5.31e-112 20 484 22 495
QHW33703.1 2.82e-86 23 481 5 466
SDS54700.1 1.40e-84 23 484 29 488

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.72e-22 23 409 45 436
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.93e-19 24 281 29 295
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 1.26e-14 22 327 156 484
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MXN_A 2.62e-14 23 275 22 236
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
1BHE_A 3.92e-07 39 395 26 358
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 2.38e-17 24 312 64 338
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P35339 5.11e-14 23 315 41 325
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
P35338 1.62e-13 23 306 41 316
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 5.10e-13 23 306 41 316
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1
Q9LW07 1.41e-11 2 288 3 271
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000237 0.999105 0.000180 0.000155 0.000148 0.000141

TMHMM  Annotations      download full data without filtering help

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