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CAZyme Information: MGYG000003172_01018
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-485 sp900555915 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900555915 | |||||||||||
| CAZyme ID | MGYG000003172_01018 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1721; End: 2839 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 29 | 363 | 2.7e-101 | 0.976897689768977 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 1.15e-114 | 30 | 360 | 2 | 303 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 2.32e-101 | 72 | 360 | 1 | 258 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.66e-84 | 62 | 363 | 57 | 335 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam01261 | AP_endonuc_2 | 0.008 | 185 | 296 | 1 | 107 | Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCD38750.1 | 1.60e-172 | 1 | 367 | 1 | 365 |
| QCP72437.1 | 1.60e-172 | 1 | 367 | 1 | 365 |
| QCD41892.1 | 3.86e-171 | 12 | 368 | 11 | 367 |
| CCG34979.1 | 2.63e-155 | 4 | 368 | 7 | 370 |
| QQY39893.1 | 5.29e-155 | 4 | 368 | 7 | 370 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4PMU_A | 1.05e-93 | 28 | 367 | 2 | 351 | Crystalstructure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306],4PMU_B Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306],4PMU_C Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306],4PMU_D Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306],4PMU_E Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306],4PMU_F Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) [Xanthomonas citri pv. citri str. 306] |
| 4PMV_A | 1.08e-93 | 28 | 367 | 3 | 352 | Crystalstructure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212) [Xanthomonas citri pv. citri str. 306],4PMV_B Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212) [Xanthomonas citri pv. citri str. 306] |
| 6FHE_A | 1.96e-92 | 19 | 360 | 3 | 333 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
| 2CNC_A | 3.00e-92 | 11 | 359 | 9 | 368 | Family10 xylanase [Cellvibrio mixtus] |
| 1UQY_A | 6.63e-92 | 15 | 359 | 15 | 359 | XylanaseXyn10B mutant (E262S) from Cellvibrio mixtus in complex with xylopentaose [Cellvibrio mixtus],1UQZ_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with 4-O-methyl glucuronic acid [Cellvibrio mixtus],1UR1_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with arabinofuranose alpha-1,3 linked to xylobiose [Cellvibrio mixtus],1UR2_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with arabinofuranose alpha 1,3 linked to xylotriose [Cellvibrio mixtus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P49942 | 9.21e-148 | 27 | 372 | 28 | 374 | Endo-1,4-beta-xylanase A OS=Bacteroides ovatus OX=28116 GN=xylI PE=2 SV=1 |
| P48789 | 6.09e-122 | 20 | 368 | 17 | 366 | Endo-1,4-beta-xylanase A OS=Prevotella ruminicola OX=839 GN=xynA PE=3 SV=1 |
| Q12603 | 3.86e-75 | 11 | 359 | 13 | 343 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P45703 | 1.99e-72 | 24 | 360 | 3 | 322 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
| O69231 | 1.32e-70 | 25 | 369 | 4 | 332 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000047 | 0.000000 | 0.000000 | 0.000000 |