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CAZyme Information: MGYG000003199_01315

You are here: Home > Sequence: MGYG000003199_01315

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM05190 sp900759815
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; HGM05190; HGM05190 sp900759815
CAZyme ID MGYG000003199_01315
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1172 MGYG000003199_125|CGC1 124302.71 4.6904
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003199 2346212 MAG United States North America
Gene Location Start: 4160;  End: 7678  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003199_01315.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 78 258 5e-52 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 4.87e-10 466 553 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
COG3866 PelB 2.14e-09 13 290 14 304
Pectate lyase [Carbohydrate transport and metabolism].
smart00060 FN3 8.21e-08 467 540 4 81
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
smart00656 Amb_all 5.24e-07 76 262 1 190
Amb_all domain.
pfam00041 fn3 1.18e-04 466 540 2 80
Fibronectin type III domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCP72135.1 0.0 23 1171 23 1185
QCD38445.1 2.05e-284 23 644 23 652
QUT73817.1 1.22e-184 26 683 22 689
QUT74519.1 1.23e-160 14 653 12 636
QUT90499.1 3.54e-150 19 459 29 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0XMA2 2.23e-123 13 451 7 408
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.23e-123 13 451 7 408
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 3.11e-123 13 451 7 408
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 2.34e-121 27 451 20 407
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 6.81e-121 27 466 20 420
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000241 0.999089 0.000181 0.000171 0.000160 0.000143

TMHMM  Annotations      download full data without filtering help

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