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CAZyme Information: MGYG000003268_01437
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900762125 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900762125 | |||||||||||
| CAZyme ID | MGYG000003268_01437 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 228; End: 1643 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 78 | 448 | 4.9e-74 | 0.916923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.14e-69 | 42 | 451 | 73 | 481 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 4.07e-25 | 86 | 421 | 9 | 272 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 2.91e-20 | 50 | 389 | 66 | 357 | polygalacturonase ADPG |
| PLN02793 | PLN02793 | 2.20e-17 | 4 | 386 | 8 | 342 | Probable polygalacturonase |
| PLN03003 | PLN03003 | 2.11e-16 | 49 | 382 | 21 | 297 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGB29865.1 | 3.38e-241 | 5 | 471 | 1 | 468 |
| BCS86062.1 | 1.31e-212 | 20 | 469 | 1 | 450 |
| QNT65212.1 | 1.77e-211 | 27 | 471 | 21 | 467 |
| QCD38368.1 | 7.51e-165 | 5 | 466 | 1 | 465 |
| QCP72058.1 | 7.51e-165 | 5 | 466 | 1 | 465 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 9.45e-59 | 42 | 432 | 18 | 396 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 2.07e-40 | 40 | 430 | 145 | 543 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 5OLP_A | 1.90e-36 | 47 | 371 | 40 | 355 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 4MXN_A | 1.18e-19 | 47 | 277 | 17 | 207 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 6KVE_A | 3.23e-11 | 229 | 432 | 121 | 306 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15922 | 2.62e-42 | 52 | 468 | 152 | 577 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| A7PZL3 | 1.93e-41 | 49 | 457 | 60 | 437 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P48978 | 4.90e-20 | 46 | 387 | 93 | 386 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
| P27644 | 1.64e-19 | 219 | 425 | 25 | 238 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q8RY29 | 1.79e-19 | 50 | 389 | 66 | 357 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000346 | 0.998915 | 0.000241 | 0.000157 | 0.000160 | 0.000147 |