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CAZyme Information: MGYG000003381_01625

You are here: Home > Sequence: MGYG000003381_01625

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoanaerobaculum sp000296385
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoanaerobaculum; Lachnoanaerobaculum sp000296385
CAZyme ID MGYG000003381_01625
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
918 101005.39 4.8686
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003381 2661892 MAG United States North America
Gene Location Start: 2548;  End: 5304  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003381_01625.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 321 731 6.1e-104 0.9786666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033840 PspC_relate_1 3.09e-04 842 917 550 615
PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC.
NF033840 PspC_relate_1 0.002 842 917 510 574
PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL00444.1 8.10e-223 1 753 88 839
QPL60595.1 2.01e-127 1 733 126 859
AYQ60810.1 3.91e-127 1 733 126 859
AWX46906.1 3.91e-127 1 733 126 859
AYA33762.1 3.91e-127 1 733 126 859

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.06e-34 324 627 18 293
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 4.42e-11 434 611 145 303
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.20e-42 7 630 94 643
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 3.06e-36 324 627 43 318
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 9.14e-34 324 627 43 318
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999910 0.000123 0.000006 0.000000 0.000000 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003381_01625.