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CAZyme Information: MGYG000003401_01836

You are here: Home > Sequence: MGYG000003401_01836

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus capitis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis
CAZyme ID MGYG000003401_01836
CAZy Family GH73
CAZyme Description N-acetylmuramoyl-L-alanine amidase domain-containing protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
698 MGYG000003401_28|CGC8 77581.29 5.6638
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003401 2394594 MAG United States North America
Gene Location Start: 510447;  End: 512543  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003401_01836.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 407 548 2.4e-29 0.984375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK08581 PRK08581 0.0 1 698 1 619
amidase domain-containing protein.
COG1705 FlgJ 4.99e-54 394 553 38 189
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
PRK06347 PRK06347 2.71e-37 315 552 74 303
1,4-beta-N-acetylmuramoylhydrolase.
COG3942 COG3942 6.93e-31 570 698 51 173
Surface antigen [Cell wall/membrane/envelope biogenesis].
smart00047 LYZ2 4.28e-30 396 550 5 143
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAW89756.1 0.0 1 698 1 698
QOX59713.1 0.0 1 698 1 698
QKH90098.1 0.0 1 698 1 698
AKL92953.1 0.0 1 698 1 698
ATN01728.1 0.0 1 698 1 698

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T1Q_A 2.39e-170 342 698 4 359
ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
3FI7_A 2.03e-40 402 552 33 183
CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
2K3A_A 2.08e-18 568 695 33 152
ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
2LRJ_A 2.47e-16 587 695 11 111
ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]
5DN5_A 8.65e-10 398 543 2 145
Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2G222 1.21e-177 117 698 82 619
N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1
P37710 2.15e-32 396 618 177 389
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
Q9CIT4 1.85e-31 399 572 62 225
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1
P39046 2.79e-31 399 552 62 214
Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
A2RHZ5 3.62e-30 402 552 65 214
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000272 0.999062 0.000172 0.000181 0.000166 0.000142

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003401_01836.