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CAZyme Information: MGYG000003482_01034

You are here: Home > Sequence: MGYG000003482_01034

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Selenomonas_C bovis
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C bovis
CAZyme ID MGYG000003482_01034
CAZy Family GH9
CAZyme Description Endoglucanase D
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
598 MGYG000003482_15|CGC3 64809.27 7.5119
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003482 2265437 MAG Fiji Oceania
Gene Location Start: 293470;  End: 295266  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003482_01034.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 133 584 6.7e-92 0.9952153110047847

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 3.97e-67 148 583 14 374
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 2.94e-29 46 128 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 7.57e-25 48 123 5 83
Cellulase N-terminal ig-like domain.
PLN02345 PLN02345 3.32e-12 183 527 34 393
endoglucanase
PLN02613 PLN02613 2.43e-11 183 531 64 412
endoglucanase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAL82172.1 3.96e-280 7 598 5 587
SNV04832.1 2.19e-275 41 589 29 578
QIB59262.1 1.89e-269 4 598 2 587
BDA09401.1 7.64e-269 41 598 29 587
CBL06693.1 9.51e-267 4 598 2 587

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U0H_A 5.18e-164 59 588 7 541
Crystalstructure of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4]
5U2O_A 1.29e-161 59 588 7 541
Crystalstructure of Zn-binding triple mutant of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4]
3X17_A 1.21e-115 48 587 20 557
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
4CJ0_A 3.91e-75 46 586 30 547
ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus]
1CLC_A 5.27e-75 46 586 44 561
ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C2S4 2.14e-74 46 586 30 547
Endoglucanase D (Fragment) OS=Acetivibrio thermocellus OX=1515 GN=celD PE=1 SV=1
A3DDN1 3.56e-74 46 586 54 571
Endoglucanase D OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celD PE=1 SV=1
P23658 3.41e-67 48 584 6 543
Cellodextrinase OS=Butyrivibrio fibrisolvens OX=831 GN=ced1 PE=1 SV=1
A7LXT3 8.28e-61 42 577 28 569
Xyloglucan-specific endo-beta-1,4-glucanase BoGH9A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02649 PE=1 SV=1
Q05156 1.13e-59 42 588 179 744
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000456 0.598941 0.399579 0.000538 0.000279 0.000184

TMHMM  Annotations      download full data without filtering help

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12 34