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CAZyme Information: MGYG000003482_01397
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Selenomonas_C bovis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C bovis | |||||||||||
| CAZyme ID | MGYG000003482_01397 | |||||||||||
| CAZy Family | CBM27 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 153478; End: 156153 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 246 | 581 | 9.3e-61 | 0.9273927392739274 |
| CBM23 | 732 | 889 | 2.7e-42 | 0.9814814814814815 |
| CBM27 | 48 | 205 | 7.4e-19 | 0.9523809523809523 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02156 | Glyco_hydro_26 | 1.09e-40 | 246 | 508 | 1 | 242 | Glycosyl hydrolase family 26. |
| COG4124 | ManB2 | 1.38e-21 | 319 | 539 | 88 | 301 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| pfam03425 | CBM_11 | 5.96e-08 | 731 | 850 | 6 | 128 | Carbohydrate binding domain (family 11). |
| pfam09212 | CBM27 | 1.67e-06 | 48 | 205 | 12 | 165 | Carbohydrate binding module 27. Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich structure comprising 13 beta strands with a single, small alpha-helix and a single metal atom. |
| pfam08547 | CIA30 | 3.86e-06 | 764 | 851 | 26 | 118 | Complex I intermediate-associated protein 30 (CIA30). This protein is associated with mitochondrial Complex I intermediate-associated protein 30 (CIA30) in human and mouse. The family is also present in Schizosaccharomyces pombe which does not contain the NADH dehydrogenase component of complex I, or many of the other essential subunits. This means it is possible that this family of protein may not be directly involved in oxidative phosphorylation. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXB85606.1 | 2.07e-239 | 42 | 891 | 97 | 950 |
| QGH21752.1 | 1.16e-238 | 42 | 891 | 97 | 950 |
| QGH25791.1 | 1.16e-238 | 42 | 891 | 97 | 950 |
| QUF84291.1 | 1.59e-238 | 43 | 891 | 275 | 1127 |
| QSX03803.1 | 1.24e-237 | 43 | 891 | 275 | 1127 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2BVT_A | 1.03e-56 | 242 | 681 | 5 | 425 | Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi] |
| 2X2Y_A | 2.40e-55 | 242 | 681 | 5 | 425 | Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi] |
| 4YN5_A | 1.70e-53 | 245 | 613 | 51 | 417 | Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750] |
| 3TP4_A | 1.83e-48 | 242 | 681 | 5 | 425 | CrystalStructure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct],3TP4_B Crystal Structure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct] |
| 1J9Y_A | 4.26e-44 | 242 | 605 | 8 | 360 | Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1A278 | 8.29e-55 | 247 | 888 | 44 | 697 | Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1 |
| P49424 | 5.36e-43 | 242 | 605 | 46 | 398 | Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2 |
| O05512 | 4.50e-18 | 341 | 575 | 121 | 326 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2 |
| P49425 | 7.98e-18 | 247 | 500 | 148 | 381 | Mannan endo-1,4-beta-mannosidase OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=manA PE=1 SV=3 |
| P16699 | 8.32e-17 | 342 | 500 | 123 | 274 | Mannan endo-1,4-beta-mannosidase A and B OS=Caldalkalibacillus mannanilyticus (strain DSM 16130 / CIP 109019 / JCM 10596 / AM-001) OX=1236954 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001976 | 0.997023 | 0.000366 | 0.000254 | 0.000183 | 0.000172 |