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CAZyme Information: MGYG000003730_00005

You are here: Home > Sequence: MGYG000003730_00005

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium vaginale_E
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium vaginale_E
CAZyme ID MGYG000003730_00005
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
491 53134.74 10.1702
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003730 1377855 MAG Canada North America
Gene Location Start: 4392;  End: 5867  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003730_00005.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3583 YabE 2.38e-41 17 314 16 309
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains [Function unknown].
pfam07501 G5 2.45e-21 211 281 3 73
G5 domain. This domain is found in a wide range of extracellular proteins. It is found tandemly repeated in up to 8 copies. It is found in the N-terminus of peptidases belonging to the M26 family which cleave human IgA. The domain is also found in proteins involved in metabolism of bacterial cell walls suggesting this domain may have an adhesive function.
NF033645 pilus_FilE 8.59e-06 300 396 40 136
putative pilus assembly protein FilE. FilE is found almost exclusively in the genus Acinetobacter, and is assigned as a putative pilus system protein from local genomic contexts that include several additional putative pilus system proteins. Note that some members of this protein family have proline-rich repeat regions for which spurious translation in another reading frame can give a false-positive match to Pfam's collagen repeat region HMM, PF01391.
PRK10927 PRK10927 2.78e-05 287 382 132 235
cell division protein FtsN.
PRK10263 PRK10263 3.83e-05 296 389 751 847
DNA translocase FtsK; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADB14393.1 3.17e-246 1 491 1 460
APW18103.1 2.46e-243 1 491 1 460
SDR85797.1 1.74e-190 1 491 1 508
ADP38195.1 1.74e-190 1 491 1 508
VEH17271.1 1.74e-190 1 491 1 508

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6M6N7 2.80e-15 34 267 38 273
Resuscitation-promoting factor Rpf2 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=rpf2 PE=1 SV=1
A0R3E0 1.19e-10 13 292 1 280
Resuscitation-promoting factor RpfB OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=rpfB PE=3 SV=2
H8EZH5 4.77e-07 17 291 3 279
Resuscitation-promoting factor RpfB OS=Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman) OX=652616 GN=rpfB PE=2 SV=1
P9WG28 4.77e-07 17 291 3 279
Resuscitation-promoting factor RpfB OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=rpfB PE=3 SV=1
P9WG29 4.77e-07 17 291 3 279
Resuscitation-promoting factor RpfB OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=rpfB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.235869 0.750910 0.010897 0.001281 0.000529 0.000504

TMHMM  Annotations      download full data without filtering help

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