CAZyme Information: MGYG000003744_01064

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9
• CAZyme ID: MGYG000003744_01064
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
864		95823.07	6.0192

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003744	2038806	MAG	Canada	North America

• Gene Location: Start: 2391; End: 4985 Strand: -

Full Sequence      

MTTNTIKCLATLLATAVAGCCGAALTAQTGVRTNALEDGTWNRSVWISAADAPVVTGEVR
DPHNRAADGSSWFVSTLTNEQRVVSAKWMTAGLGVYDLYLNGETVGTEILKPGFTHYAKT
KRSFTYDITDALKKEAGAENIFAAEMTPGWWADKIVTPDGHEGMIGKKCAFRGVVELTFA
DGSRKLYGTDLDHWKAGIAGPVQHAAIFDGEEYDARVLPGFATPERLAVPEENTEFAGEI
LPSDGAEIYFREDLALAPVQAYSWKGVRGKDKEHHGKVVVTREYADGREILLRRGETLVV
DFGQNCAGVPAFVFRAKEGTRLTCLPGELLNDGRGALKRGMDGPEGSVHRLNLRTPEQGM
RLCYTFAGRKAETYRPTHTFFGYRYISVTATDAVRFRSIRSIPVTSITREMETAEIVTGN
ELVNKLISNSLWGQRSNYLSVTTDCPQRNERLGWTADTQVFAEAGTFFANTARFFHKWMR
DMRDTQGEFGGFPGVAPFGQYGSEPNSMMRVGWSDAGVIVPWTVWKQFGDTRIIDENWEA
MARYMDHVNETKYDHQTLRAENGNYQWGDWLSYEALESCSGRAFQKDAAGKRTVLPEALV
YWNYLCASYWAVDAGMMRDMAAATGRDAQKYADMAEAAKAYLREQFLDGAGSFKTPVLNT
MQTPALFALKNGLVEGVAKDALVARLRENFAAHDNCLQTGFLGTSILMNTLTENGMEDIA
RELLFQRRNPSWLYSIDNGATTIWERWNSYTIEDGMGPKGMNSFNHYAYGSVCAWIWESV
CGIAADTAAPGFKHIVMKPVPDKRLGFVKAAYHSAAGLIRSEWKYEGDKWIWTFTIPEGA
TASVTLPGETEVREYAPGTYTVAR

Enzyme Prediction     

No EC number prediction in MGYG000003744_01064.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	295	846	2.4e-141	0.9880952380952381

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.65e-105	412	780	2	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	2.74e-27	82	224	2	140	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam17390	Bac_rhamnosid_C	1.34e-18	782	854	1	71	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam05592	Bac_rhamnosid	1.17e-14	294	389	4	85	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIX65068.1	0.0	21	864	27	868
QUR48396.1	0.0	21	864	27	868
QUT79109.1	0.0	28	864	30	856
CBK67329.1	0.0	28	864	30	856
BBK93107.1	0.0	21	864	27	868

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	1.90e-104	39	860	290	1009	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	1.04e-74	24	849	98	849	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6I60_A	1.42e-66	73	847	179	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	8.27e-104	39	860	290	1009	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	4.27e-97	74	847	180	879	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	5.06e-94	36	852	141	884	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	2.03e-47	36	846	141	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000622	0.257941	0.740980	0.000137	0.000168	0.000141

TMHMM  Annotations     

start	end
9	31