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CAZyme Information: MGYG000003803_01414
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pantoea conspicua | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea conspicua | |||||||||||
| CAZyme ID | MGYG000003803_01414 | |||||||||||
| CAZy Family | GT5 | |||||||||||
| CAZyme Description | Glycogen synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 125; End: 1444 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 21 | 436 | 3.4e-145 | 0.864406779661017 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG0297 | GlgA | 0.0 | 2 | 438 | 40 | 478 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| PRK00654 | glgA | 0.0 | 2 | 439 | 40 | 464 | glycogen synthase GlgA. |
| cd03791 | GT5_Glycogen_synthase_DULL1-like | 0.0 | 2 | 437 | 39 | 474 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| TIGR02095 | glgA | 0.0 | 2 | 438 | 40 | 473 | glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| PRK14099 | PRK14099 | 2.42e-172 | 2 | 438 | 43 | 479 | glycogen synthase GlgA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGY56660.1 | 0.0 | 1 | 439 | 39 | 477 |
| AZI52569.1 | 0.0 | 1 | 439 | 39 | 477 |
| QTC50836.1 | 0.0 | 1 | 439 | 39 | 477 |
| QIA52936.1 | 0.0 | 1 | 439 | 39 | 477 |
| AYP21756.1 | 0.0 | 1 | 439 | 39 | 477 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3D1J_A | 8.10e-269 | 1 | 438 | 39 | 476 | ChainA, Glycogen synthase [Escherichia coli] |
| 2QZS_A | 6.29e-268 | 1 | 438 | 39 | 476 | CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12] |
| 3COP_A | 5.15e-267 | 1 | 438 | 39 | 476 | ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli] |
| 1RZU_A | 3.48e-120 | 2 | 439 | 40 | 476 | ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens] |
| 1RZV_A | 2.84e-116 | 2 | 439 | 40 | 476 | ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZV_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B2VJU7 | 6.46e-284 | 1 | 439 | 39 | 477 | Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=glgA PE=3 SV=1 |
| A8AQY0 | 7.26e-274 | 1 | 438 | 39 | 476 | Glycogen synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=glgA PE=3 SV=1 |
| A7MGE0 | 1.98e-271 | 1 | 439 | 39 | 477 | Glycogen synthase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=glgA PE=3 SV=1 |
| B7LSE0 | 1.14e-270 | 1 | 438 | 39 | 476 | Glycogen synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=glgA PE=3 SV=1 |
| B5R394 | 1.33e-269 | 1 | 438 | 39 | 476 | Glycogen synthase OS=Salmonella enteritidis PT4 (strain P125109) OX=550537 GN=glgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000054 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |