Species | Gemmiger sp900540595 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540595 | |||||||||||
CAZyme ID | MGYG000003921_01602 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 46439; End: 47932 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 115 | 492 | 3.5e-61 | 0.8861538461538462 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 6.44e-56 | 15 | 403 | 13 | 398 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 1.43e-18 | 235 | 393 | 76 | 229 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN03010 | PLN03010 | 1.75e-12 | 235 | 397 | 146 | 304 | polygalacturonase |
PLN03003 | PLN03003 | 5.53e-11 | 243 | 391 | 137 | 279 | Probable polygalacturonase At3g15720 |
PLN02155 | PLN02155 | 4.11e-07 | 245 | 403 | 146 | 299 | polygalacturonase |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AOZ97711.1 | 1.82e-179 | 6 | 492 | 9 | 513 |
ADL35584.1 | 4.20e-178 | 6 | 492 | 8 | 510 |
QOL34313.1 | 1.75e-144 | 17 | 495 | 19 | 507 |
QOL33043.1 | 4.95e-144 | 17 | 496 | 19 | 508 |
BAV04097.1 | 5.12e-102 | 11 | 496 | 36 | 492 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 1.63e-38 | 85 | 435 | 27 | 385 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 4.25e-37 | 97 | 393 | 56 | 350 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 1.73e-30 | 47 | 478 | 114 | 565 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
1BHE_A | 5.13e-17 | 102 | 415 | 26 | 320 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
4MXN_A | 1.40e-07 | 85 | 281 | 21 | 185 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 3.04e-33 | 95 | 493 | 72 | 423 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 4.78e-33 | 12 | 492 | 44 | 578 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P27644 | 2.58e-19 | 239 | 408 | 16 | 186 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
P18192 | 3.17e-18 | 77 | 474 | 25 | 402 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
P26509 | 3.44e-16 | 102 | 415 | 52 | 346 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000051 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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