CAZyme Information: MGYG000003957_01353

Basic Information

• Species: Parabacteroides sp014287585
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
• CAZyme ID: MGYG000003957_01353
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
625	MGYG000003957_21|CGC1	70481.53	7.5443

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003957	4724401	MAG	United Kingdom	Europe

• Gene Location: Start: 10444; End: 12321 Strand: -

Full Sequence      

MMILFKVKTFSFLLACACSASGMAQVVNNSPVKQVKISGYVGTRIADCIEHRVKAQDVDH
LVEPFRHQTEKSRWQSEFWGKWIQGAIASYRYNQDPELYRIIKDAAESLMATQSANGYIG
NYAPEYQLQQWDVWGRKYTSLGLIAWYDLSGDKKALEAACKVVDHLMTQVGPGKVDIVST
GNYIGMPSSSVLEPVMYLYNRTKEARYLDFAKYIVGQWETPGGPQLISKAIDEVPVANRF
PHPKTWFSRENGQKAYEMMSCYEGLLELYKVTGNPLYLSVVEKTVGHIVREEINVAGSGS
AFECWYGGKERQTQPTYHTMETCVTFTWMQLCNRLLQMTGNSLYADYMETAIYNALMASL
KADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFAMIPQFAYQVQDDCVRVNFYA
PSEAELVLPGKKPVRLKQTTDYPRTDQIEIEVDPAKEAAFTIALRIPAWSKIATVSVNGS
PESGVLQGAYLPVSRKWKKGDRITVKLDLRARLVERNQAQAIVRGPLVLARDSRFGDGFV
DEASVIVSKDGYVELTPVEAPDFAWLAFTAPMVLGTDLESNRVPKQIHFCDFASAGNTWD
KTQRYRVWLPKTLNVMHSPYKPYNQ

Enzyme Prediction     

No EC number prediction in MGYG000003957_01353.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	66	529	7.1e-65	0.9141221374045801

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	7.28e-73	80	530	61	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	2.75e-71	24	530	6	501	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ARE60508.1	9.26e-240	28	625	20	622
QOY86860.1	9.17e-47	81	562	97	578
ADH61394.1	1.21e-46	31	528	13	557
AXC10260.1	1.34e-43	81	531	133	592
SNY90695.1	1.53e-43	32	609	24	640

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6EX6_A	2.72e-33	81	535	74	553	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A	6.84e-32	47	554	40	582	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.28e-29	47	554	40	582	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A	2.75e-29	75	533	90	610	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
6YQH_AAA	9.08e-24	321	530	337	560	ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	1.02e-19	81	528	80	564	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001617	0.569040	0.428242	0.000426	0.000360	0.000288

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003957_01353.