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CAZyme Information: MGYG000004053_00118

You are here: Home > Sequence: MGYG000004053_00118

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312;
CAZyme ID MGYG000004053_00118
CAZy Family GH142
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
555 62960.98 8.6788
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004053 2223892 MAG United Kingdom Europe
Gene Location Start: 39034;  End: 40701  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004053_00118.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 36 523 2.7e-163 0.9958246346555324

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10137 PRK10137 4.29e-09 225 350 581 712
alpha-glucosidase; Provisional
COG3408 GDB1 2.58e-06 154 364 345 551
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam01204 Trehalase 6.82e-05 132 274 207 357
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
pfam06202 GDE_C 7.61e-04 154 364 90 314
Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).
pfam17389 Bac_rhamnosid6H 0.007 161 270 111 217
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CUA19757.1 7.20e-197 31 527 33 529
AKA52990.1 4.12e-196 31 527 33 529
QCT79808.1 4.12e-196 31 527 33 529
ANQ61513.1 4.12e-196 31 527 33 529
QRP88912.1 1.17e-195 31 527 33 529

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQS_A 9.38e-111 30 528 626 1104
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQR_A 2.74e-105 30 528 626 1104
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 7.99e-23 24 532 273 816
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 6.25e-22 24 532 304 847
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003395 0.757517 0.238262 0.000361 0.000227 0.000229

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004053_00118.