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CAZyme Information: MGYG000004172_02371

You are here: Home > Sequence: MGYG000004172_02371

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; ;
CAZyme ID MGYG000004172_02371
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
616 MGYG000004172_16|CGC1 69762.86 6.9434
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004172 3050906 MAG United Kingdom Europe
Gene Location Start: 5480;  End: 7330  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004172_02371.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 385 555 7.3e-49 0.9832402234636871

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 6.79e-09 382 573 17 202
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332 DUF4962 2.82e-06 40 221 137 338
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYY35209.1 2.39e-176 34 615 2 597
QYY34830.1 1.46e-173 36 615 42 634
QYY35244.1 5.73e-170 38 615 67 655
AQT66997.1 1.23e-166 36 615 38 623
AXE20463.1 6.36e-152 1 597 13 618

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 2.16e-07 91 306 199 416
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 2.16e-07 91 306 199 416
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000258 0.305537 0.693793 0.000140 0.000139 0.000119

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004172_02371.