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CAZyme Information: MGYG000004210_00048

You are here: Home > Sequence: MGYG000004210_00048

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004;
CAZyme ID MGYG000004210_00048
CAZy Family GH59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1083 MGYG000004210_1|CGC3 120016.75 5.0627
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004210 2253787 MAG United Kingdom Europe
Gene Location Start: 45839;  End: 49090  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH59 56 738 3.9e-153 0.9920760697305864

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02057 Glyco_hydro_59 4.13e-85 61 397 1 291
Glycosyl hydrolase family 59.
COG5492 YjdB 8.08e-12 837 985 145 287
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam06439 DUF1080 5.31e-08 581 738 17 182
Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.
COG5520 XynC 1.27e-07 146 306 110 270
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02368 Big_2 1.73e-07 879 944 8 72
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMW11854.1 2.34e-254 21 919 19 958
QLH25411.1 2.27e-251 2 922 5 961
QUW95523.1 2.26e-248 21 860 22 906
AZM74018.1 9.14e-247 37 860 34 903
QKW59509.1 7.24e-246 37 860 34 903

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5SNX7 4.40e-17 65 709 38 628
Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
Q0VA39 1.25e-15 40 649 24 576
Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1
Q498K0 1.42e-11 58 649 44 575
Galactocerebrosidase OS=Xenopus laevis OX=8355 GN=galc PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.065612 0.754130 0.179008 0.000697 0.000272 0.000249

TMHMM  Annotations      download full data without filtering help

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