You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004223_00366
You are here: Home > Sequence: MGYG000004223_00366
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1883 sp900763305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; UMGS1883; UMGS1883; UMGS1883; UMGS1883 sp900763305 | |||||||||||
| CAZyme ID | MGYG000004223_00366 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1162; End: 2700 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 186 | 469 | 1.1e-47 | 0.9594594594594594 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd06545 | GH18_3CO4_chitinase | 8.36e-47 | 187 | 472 | 1 | 253 | The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas. |
| pfam00704 | Glyco_hydro_18 | 2.94e-43 | 186 | 461 | 1 | 307 | Glycosyl hydrolases family 18. |
| smart00636 | Glyco_18 | 1.42e-39 | 186 | 405 | 1 | 240 | Glyco_18 domain. |
| cd06548 | GH18_chitinase | 1.92e-34 | 187 | 408 | 1 | 269 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| cd00598 | GH18_chitinase-like | 6.20e-26 | 187 | 366 | 1 | 179 | The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOX64831.1 | 4.46e-132 | 172 | 478 | 34 | 340 |
| ARE87297.1 | 1.91e-123 | 168 | 480 | 24 | 331 |
| AOY76825.1 | 1.91e-123 | 168 | 480 | 24 | 331 |
| QAT42625.1 | 2.48e-123 | 185 | 463 | 37 | 315 |
| QIB69208.1 | 1.62e-120 | 177 | 463 | 25 | 311 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6XYZ_A | 1.48e-34 | 170 | 489 | 1 | 319 | Crystalstructure of the GH18 chitinase ChiB from the chitin utilization locus of Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101] |
| 5XWQ_A | 8.77e-23 | 206 | 404 | 20 | 239 | Crystalstructure of chitinase (RmChi1) from Rhizomucor miehei (sp p32 2 1, MR) [Rhizomucor miehei],5YUQ_A Chain A, Chintase [Rhizomucor miehei],5YUQ_B Chain B, Chintase [Rhizomucor miehei],7FBT_A Chain A, Chitinase [Rhizomucor miehei] |
| 5XWF_A | 5.33e-22 | 206 | 404 | 20 | 239 | ChainA, Fungal chitinase from Rhizomucor miehei (SeMet-substituted proteins) [Rhizomucor miehei] |
| 6JM7_A | 1.15e-21 | 182 | 440 | 1 | 290 | Crystalstructure of Ostrinia furnacalis Group IV chitinase [Ostrinia furnacalis],6JMB_A Chain A, ofchtiv-allosamidin [Ostrinia furnacalis] |
| 6JM8_A | 1.24e-20 | 182 | 440 | 1 | 290 | Crystalstructure of Ostrinia furnacalis Group IV chitinase [Ostrinia furnacalis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9W5U2 | 3.86e-18 | 178 | 402 | 1901 | 2155 | Probable chitinase 10 OS=Drosophila melanogaster OX=7227 GN=Cht10 PE=2 SV=2 |
| P48827 | 4.15e-17 | 198 | 501 | 55 | 391 | Endochitinase 42 OS=Trichoderma harzianum OX=5544 GN=chit42 PE=1 SV=1 |
| A6N6J0 | 1.04e-16 | 198 | 436 | 56 | 311 | Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1 |
| P32470 | 1.77e-16 | 172 | 502 | 25 | 392 | Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2 |
| C5P230 | 1.82e-16 | 173 | 492 | 25 | 411 | Endochitinase 1 OS=Coccidioides posadasii (strain C735) OX=222929 GN=CTS1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000850 | 0.665176 | 0.333126 | 0.000405 | 0.000227 | 0.000197 |