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CAZyme Information: MGYG000004262_00708
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-110 sp900546075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-110; CAG-110 sp900546075 | |||||||||||
| CAZyme ID | MGYG000004262_00708 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 77485; End: 79137 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 6.75e-25 | 160 | 351 | 439 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| cd18008 | DEXDc_SHPRH-like | 1.95e-06 | 2 | 234 | 55 | 215 | DEXH-box helicase domain of SHPRH-like proteins. The SHPRH-like subgroup belongs to the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| smart00490 | HELICc | 5.56e-05 | 431 | 517 | 1 | 82 | helicase superfamily c-terminal domain. |
| pfam00271 | Helicase_C | 1.03e-04 | 446 | 517 | 40 | 109 | Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. |
| cd18793 | SF2_C_SNF | 2.84e-04 | 425 | 529 | 34 | 135 | C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXF51455.1 | 6.54e-133 | 1 | 531 | 2601 | 3177 |
| AEY69616.1 | 4.13e-132 | 1 | 531 | 2508 | 3084 |
| ASV45029.1 | 6.50e-131 | 1 | 531 | 2368 | 2940 |
| QIW86704.1 | 6.55e-129 | 1 | 531 | 2436 | 3008 |
| QIW86628.1 | 6.55e-129 | 1 | 531 | 2436 | 3008 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 3.04e-12 | 139 | 334 | 1041 | 1244 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000079 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |