logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004384_00150

You are here: Home > Sequence: MGYG000004384_00150

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus;
CAZyme ID MGYG000004384_00150
CAZy Family CBM4
CAZyme Description Cellulose 1,4-beta-cellobiosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
844 92501.13 4.1134
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004384 2222403 MAG Israel Asia
Gene Location Start: 26323;  End: 28857  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.78

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 256 740 9.1e-122 0.9904306220095693
CBM4 2 121 2.4e-20 0.7936507936507936

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 3.80e-79 259 741 2 374
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 1.30e-26 168 250 4 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 3.64e-24 168 245 5 83
Cellulase N-terminal ig-like domain.
PLN03009 PLN03009 5.54e-09 256 670 29 414
cellulase
PLN02340 PLN02340 3.62e-08 315 670 72 418
endoglucanase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21576.1 0.0 1 842 57 900
CBL17684.1 1.00e-262 1 747 64 861
QNU67291.1 3.32e-246 2 764 67 812
CUH93326.1 8.83e-241 2 743 71 789
AUG58129.1 5.12e-238 2 743 53 776

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UT9_A 2.89e-171 166 746 7 606
ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]
1RQ5_A 4.72e-170 166 743 7 603
ChainA, Cellobiohydrolase [Acetivibrio thermocellus]
6DHT_A 7.43e-73 166 741 18 561
Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483]
3X17_A 1.48e-70 156 741 2 553
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
4CJ0_A 1.57e-68 156 743 20 547
ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DCH1 3.18e-185 24 743 90 810
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
P0C2S1 1.26e-184 24 743 90 810
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1
Q05156 1.57e-155 17 747 66 745
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1
P14090 1.91e-145 12 747 212 910
Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2
P10476 5.73e-134 168 743 39 597
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
814 836