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CAZyme Information: MGYG000004385_00203
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp900545725 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900545725 | |||||||||||
| CAZyme ID | MGYG000004385_00203 | |||||||||||
| CAZy Family | PL9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 66984; End: 74882 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 771 | 1163 | 3.2e-123 | 0.984 |
| CE8 | 1901 | 2195 | 3.4e-75 | 0.9722222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 1.07e-45 | 1888 | 2197 | 75 | 404 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 5.01e-38 | 1901 | 2197 | 6 | 298 | Pectinesterase. |
| PLN02432 | PLN02432 | 1.01e-32 | 1883 | 2196 | 9 | 287 | putative pectinesterase |
| PLN02773 | PLN02773 | 1.60e-31 | 1901 | 2176 | 11 | 274 | pectinesterase |
| PLN02665 | PLN02665 | 4.01e-31 | 1901 | 2172 | 74 | 328 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACR72234.1 | 0.0 | 1169 | 2211 | 34 | 1081 |
| ACR71158.1 | 1.21e-302 | 199 | 1173 | 617 | 1649 |
| BCJ94249.1 | 6.05e-302 | 103 | 1184 | 140 | 1206 |
| ABX44216.1 | 6.24e-292 | 194 | 1189 | 219 | 1217 |
| ADL35206.1 | 3.24e-276 | 196 | 1112 | 1465 | 2396 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2NSP_A | 1.71e-31 | 1906 | 2198 | 17 | 337 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1RU4_A | 1.45e-29 | 775 | 1049 | 18 | 292 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 3UW0_A | 1.83e-29 | 1907 | 2200 | 44 | 363 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 1QJV_A | 6.57e-27 | 1906 | 2198 | 17 | 337 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 6.57e-27 | 1906 | 2198 | 17 | 337 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P22751 | 2.06e-55 | 423 | 1049 | 82 | 639 | Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1 |
| P0C1A6 | 7.15e-32 | 775 | 1102 | 43 | 368 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P0C1A7 | 1.22e-28 | 775 | 1049 | 43 | 317 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
| P0C1A9 | 5.64e-26 | 1906 | 2198 | 41 | 361 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| P0C1A8 | 7.61e-26 | 1906 | 2198 | 41 | 361 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000340 | 0.998952 | 0.000196 | 0.000180 | 0.000144 | 0.000140 |
