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CAZyme Information: MGYG000004472_00987

You are here: Home > Sequence: MGYG000004472_00987

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QALR01 sp900553085
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; QALR01; QALR01 sp900553085
CAZyme ID MGYG000004472_00987
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000004472_6|CGC2 81851.45 5.0095
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004472 2148581 MAG Israel Asia
Gene Location Start: 32494;  End: 34659  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004472_00987.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 271 714 2e-40 0.8492063492063492

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.63e-14 375 714 10 336
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJY74261.1 2.46e-195 8 714 18 720
QGY42778.1 2.13e-189 11 712 41 740
QHI69947.1 2.99e-188 8 710 7 689
BBD46135.1 6.59e-187 9 712 48 749
QHW31764.1 5.26e-186 8 710 2 704

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 2.39e-10 374 614 542 779
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.964934 0.034988 0.000029 0.000038 0.000018 0.000023

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004472_00987.