CAZyme Information: MGYG000004499_00578

Basic Information

• Species: Victivallis sp900551245
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900551245
• CAZyme ID: MGYG000004499_00578
• CAZy Family: CBM9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1300	MGYG000004499_3|CGC3	144168.83	7.3483

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004499	4071424	MAG	Israel	Asia

• Gene Location: Start: 148490; End: 152392 Strand: -

Full Sequence      

MKLYAPFFFPLLCTALCAGPIWTGSGPNWKRGVYSLADRYSTKPEVALTQEEGTPALKIQ
FSGCKVYQGVSLPETAVPEGVASVRFDLKILSGAGPSKLCLREWRNGKWEDFETPFQCGG
DGWKTYRVPFSQFKFTGAVNYPDSNRKLDLDAPLIFSVLGTGKPGSFLLRNPAFEAAAGT
TPSPAPKQHLVWDGQLRSVRTVVDKQTAKPVYELAGNGLKIHFSGCKVYQGIEFPPVRMP
KNAVGVAFRIKLLSGEAPNELNLREWYRDGWEDFAARFQVAPGVWNEVELPLNRFQFAGV
VNRPDSNRKIDGDKQILFSIISRGGAGDFLLEDLRWIVDEPEKKTSRNLLRGDVDFETGA
GDWLPTAMHAEGPVTVKGDAANGERSLLLTGDGTFLSGFTRDLIQPNRHYVLSFYARGTA
GKRASLKVQALNYQLLGGRDFFLSDRWERYCATFTTGNAVDTIHFLRAWAEPGGRMQLDA
IQLEEGERATAFVPSEPLSVSPVLSGASGGVLVRGSEVPELEIAVKNNALPTGRFPLTLQ
LELRGRTLHAETLQSAFQPVNIRIPCRFAGEAGYYPTEVKIFDASGRELLTRSFPFVIVD
APATTARRNWGLQMGRGTVPAAALRKIGINWLRRNSLTWDEIEKNGPVTWSETNPPRGKR
LTDDFRQLGTVRRFDLVPAYARDNGTWARNPADILNFLRYLIHVEGDRIDAFEMSNEPDV
MLGRRKDKTPQEQAEYLCGLLRAARPLLKTTGRPVVVNASGGRPGIDMIRYVAEHAPESF
DVLAVHPYVFPRELADDGRFTATPEYGGCLDTLRECRAILDQYAPHLQMGIGELGWSLSD
FSGYDSPAAHRQAAFLARTLLLSLCEPQLQWFIWFTMINMPEGGRFDYGIWRNDGGPKPL
PAVAAYAQAIRAVGNTVGAAREILSGDIRLIRGDSENQSCFALWSVEPGTVPRPISLPAE
VTATDLYGTPLASRELLPGDSPCYLFTSKENADTVEAQLKQQLEESAPLRLRLQLISDRQ
VRLVLHNRLDRPWNGTFLCGGKGGSVTLTPRGKCELLHSIRPLVLPESGASLEVAFQEDG
GKSFSISAPLPECLPVVRRELADWRNYDFRKEQNLLILDSRKDVFPPDPGIKWTGADDLS
GKFFFCYDSNAFYVMAEIRDDEQNNPFSGDQIWRGDSIQLAFDPGNNAVPGRPGYDPDDY
EYGASLGSRFWCWQSPLAPPGAVSGPEHEIRRDGDRTIYRLRFPWSTLAPLRPAPGRIFG
FALAVKDRDGKNAQTTLCFGGEGIVNGKNPALFRKLILAR

Enzyme Prediction     

No EC number prediction in MGYG000004499_00578.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM9	1134	1279	1.2e-17	0.7582417582417582

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd09621	CBM9_like_5	2.16e-39	1116	1298	3	188	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
cd09619	CBM9_like_4	4.03e-21	1111	1273	11	165	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other domains.
cd00241	DOMON_like	2.63e-16	1124	1279	3	158	Domon-like ligand-binding domains. DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.
pfam06452	CBM9_1	1.62e-11	1133	1298	21	181	Carbohydrate family 9 binding domain-like. CBM9_1 is a C-terminal domain on bacterial xylanase proteins, and it is tandemly repeated in a number of family-members. The CBM9 module binds to amorphous and crystalline cellulose and a range of soluble di- and monosaccharides as well as to cello- and xylo- oligomers of different degrees of polymerization. Comparison of the glucose and cellobiose complexes during crystallisation reveals surprising differences in binding of these two substrates by CBM9-2. Cellobiose was found to bind in a distinct orientation from glucose, while still maintaining optimal stacking and electrostatic interactions with the reducing end sugar.
pfam02018	CBM_4_9	2.25e-10	355	462	8	123	Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM44104.1	1.84e-173	204	1298	66	1168
AHF94659.1	1.34e-38	621	1298	6	712
AZS16815.1	3.17e-28	618	1296	418	1180
AJY74277.1	1.40e-27	474	1298	199	1087
AHF89595.1	3.93e-26	524	1294	59	865

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.003190	0.298143	0.698187	0.000203	0.000136	0.000132

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004499_00578.