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CAZyme Information: MGYG000004634_00907

You are here: Home > Sequence: MGYG000004634_00907

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441;
CAZyme ID MGYG000004634_00907
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
724 79302.8 4.2139
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004634 2025534 MAG Germany Europe
Gene Location Start: 2686;  End: 4860  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004634_00907.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 332 678 5.6e-43 0.7466666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14256 Dockerin_I 8.09e-09 29 89 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam13499 EF-hand_7 2.05e-05 31 86 12 67
EF-hand domain pair.
pfam13229 Beta_helix 2.13e-04 395 496 7 94
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
cd14253 Dockerin 3.20e-04 30 86 1 53
Dockerin repeat domain. Dockerins are modules in the cellulosome complex that often anchor catalytic subunits by binding to cohesin domains of scaffolding proteins. Three types of dockerins and their corresponding cohesin have been described in the literature. This alignment models two consecutive dockerin repeats, the functional unit.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBZ48778.1 4.30e-113 144 724 36 606
BAK28435.1 4.30e-113 144 724 36 606
QKI00169.1 4.30e-113 144 724 36 606
QWX86240.1 4.30e-113 144 724 36 606
CBI14069.1 3.31e-112 144 724 36 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 4.30e-23 346 654 57 296
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 7.25e-23 371 654 117 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 3.14e-22 346 654 82 321
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000644 0.445052 0.553673 0.000221 0.000212 0.000179

TMHMM  Annotations      download full data without filtering help

start end
7 29