chitin
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Chitin is a linear polysaccharide composed of repeating β(1,4)-N-acetyl-D-glucosamine units. As the second most abundant natural polysaccharide, chitin is known as the primary component of fungi cell wall, it also present in marine invertebrates, insects, and can be produced by bacteria.
References
Hofmann, A. (1929). Über den enzymatischen Abbau des Chitins und Chitosans [On the enzymatic degradation of chitin and chitosan] (Thesis). Zurich, Switzerland: University of Zurich.
Matyjaszewski, K., Möller, M., Schmidt, H., & Ueda, M. (2012). Polymer science: a comprehensive reference. Elsevier.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | Species Name |
|---|---|---|---|---|
| chitin | MGYG000000015 | MGYG000000015_1|CGC10 |
GH19|CBM73|CBM5,GH23,CBM5|GH18,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter mori |
| chitin | MGYG000000019 | MGYG000000019_3|CGC2 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.3.1,3.A.15.1.1,null,null,3.A.15.1.1,GH18|CBM5,GH23,CBM73|CBM5|GH19
|
Enterobacter cloacae_O |
| chitin | MGYG000000147 | MGYG000000147_4|CGC2 |
4.A.3.2.9,4.A.3.2.2,4.A.3.2.8,GH4,GntR,null,CBM5|CBM12|GH18,CBM5|CBM12|GH18|CBM73
|
Bacillus paralicheniformis |
| chitin | MGYG000000151 | MGYG000000151_10|CGC1 |
3.A.1.115.1,2.A.23.1.8,3.2.1.14|CBM5|GH18,3.2.1.14|CBM5|GH18
|
Clostridium paraputrificum |
| chitin | MGYG000000152 | MGYG000000152_42|CGC1 |
9.B.34.1.2,GH94|GT84|GH0,GH94|GT84
|
Lacrimispora sp902363835 |
| chitin | MGYG000000235 | MGYG000000235_2|CGC2 |
GH19|CBM73|CBM5,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter kobei |
| chitin | MGYG000000373 | MGYG000000373_23|CGC1 |
2.A.50.2.1,null,null,GT84|GH0|GH94,GT84|GH0|GH94,null,CE4
|
UMGS1537 sp900761045 |
| chitin | MGYG000001016 | MGYG000001016_10|CGC2 |
CE4,null,GT84|GH94|GH0,GT84|GH94|GH0,null,null,2.A.50.2.1
|
UMGS1537 sp900543695 |
| chitin | MGYG000001318 | MGYG000001318_10|CGC8 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,null,3.A.15.3.1,3.A.15.1.1,null,null,3.A.15.2.1,CBM5|GH18,GH23,CBM5|GH19|CBM73
|
Enterobacter cancerogenus |
| chitin | MGYG000001328 | MGYG000001328_4|CGC3 |
CBM5|GH18,3.2.1.14|CBM5|GH18,CBM73|CBM5|GH18,null,null,9.A.5.1.1
|
Clostridium tertium |
| chitin | MGYG000001476 | MGYG000001476_17|CGC4 |
GH94|GT84,GH94|GT84,TetR_N,null,3.A.1.3.25,3.A.1.3.2,3.A.1.3.27
|
Caproiciproducens sp000752215 |
| chitin | MGYG000001536 | MGYG000001536_11|CGC17 |
3.A.15.2.1,GH18|CBM5,GH23,GH19|CBM5|CBM73
|
Enterobacter_A timonensis |
| chitin | MGYG000001548 | MGYG000001548_4|CGC68 |
3.A.3.7.2,3.A.3.7.2,3.A.3.7.2,CBM5|CBM12|3.2.1.-|GH18,CBM12|CBM2|GH18|3.2.1.14,LacI,GH94,null,3.A.1.1.29,3.A.1.1.10
|
Paenibacillus_A tuaregi |
| chitin | MGYG000001553 | MGYG000001553_5|CGC13 |
2.A.66.1.32,CBM5|GH18,CBM5|GH18
|
Clostridium_P mediterraneense |
| chitin | MGYG000001571 | MGYG000001571_1|CGC4 |
GH94|GT84,GH94|GH0|GT84,GT2,Pyr_redox_2,9.B.102.2.4,null,9.B.102.1.4
|
Lacrimispora sp000526575 |
| chitin | MGYG000001647 | MGYG000001647_14|CGC1 |
GH0|GT84|GH94,GH94|GT84,GH0|GT84|GH94,null,9.B.18.2.1,Aminotran_1_2,9.B.18.1.3,GT2,GT4,GT4
|
UMGS1781 sp900553695 |
| chitin | MGYG000001673 | MGYG000001673_31|CGC1 |
2.A.50.2.1,null,null,GH0|GT84|GH94,GH0|GT84|GH94
|
UMGS1537 sp900552695 |
| chitin | MGYG000001691 | MGYG000001691_16|CGC2 |
1.B.25.1.13,1.B.52.2.1,null,GH18|CBM5,GH18|CBM5,CBM5,GH19|CBM73|CBM5
|
Aeromonas veronii_A |
| chitin | MGYG000001692 | MGYG000001692_21|CGC2 |
CBM73|CBM5|GH19,null,GH18|CBM5,2.A.21.9.2
|
Aeromonas dhakensis |
| chitin | MGYG000001700 | MGYG000001700_2|CGC1 |
CBM5|GH19|CBM73|AA10,GH23,CBM5|GH18,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.3.1,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Citrobacter_A sedlakii |
| chitin | MGYG000002340 | MGYG000002340_1|CGC9 |
3.A.5.1.1,HTH_11,GT84|GH94,GT84|GH94
|
Intestinimonas butyriciproducens |
| chitin | MGYG000002357 | MGYG000002357_1|CGC3 |
4.A.3.2.9,4.A.3.2.2,4.A.3.2.8,GH4,GntR,null,CBM12|GH18|CBM5,CBM73|CBM12|GH18|CBM5
|
Bacillus licheniformis |
| chitin | MGYG000002414 | MGYG000002414_1|CGC100 |
8.A.21.2.2,null,CBM12|CBM5|GH18,CBM12|CBM73|CBM5|GH18
|
Paenibacillus odorifer |
| chitin | MGYG000002493 | MGYG000002493_1|CGC2 |
3.A.1.122.4,TetR_N,CBM5|GH18,CBM5|GH18
|
Enterococcus_B pernyi |
| chitin | MGYG000002494 | MGYG000002494_50|CGC12 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.3.1,3.A.15.1.1,null,null,3.A.15.2.1,GH18|CBM5,GH23,CBM73|GH19|CBM5
|
Citrobacter_B koseri |
| chitin | MGYG000002498 | MGYG000002498_2|CGC2 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,null,3.A.15.1.1,3.A.15.3.1,3.A.15.1.1,null,null,3.A.15.2.1,CBM5|GH18,GH23,GH19|CBM73|CBM5
|
Enterobacter sichuanensis |
| chitin | MGYG000002499 | MGYG000002499_11|CGC1 |
GH19|CBM5|CBM73,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter roggenkampii |
| chitin | MGYG000002500 | MGYG000002500_2|CGC26 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,null,3.A.15.1.1,3.A.15.3.1,3.A.15.1.1,null,null,3.A.15.1.1,GH18|CBM5,GH23,CBM5|CBM73|GH19
|
Enterobacter cloacae |
| chitin | MGYG000002502 | MGYG000002502_28|CGC2 |
GH19|CBM73|CBM5,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter chengduensis |
| chitin | MGYG000002503 | MGYG000002503_8|CGC1 |
CBM5|GH19|CBM73,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,null,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter ludwigii |
| chitin | MGYG000002504 | MGYG000002504_3|CGC19 |
1.B.22.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,null,null,3.A.15.2.1,GH18|CBM5,GH23,CBM5|CBM73|GH19
|
Enterobacter hormaechei_A |
| chitin | MGYG000002519 | MGYG000002519_9|CGC1 |
CBM5|GH19|CBM73,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.1.1,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Enterobacter asburiae_B |
| chitin | MGYG000002526 | MGYG000002526_1|CGC13 |
1.B.14.2.7,2.A.1.27.1,HTH_3,null,2.A.21.9.2,CBM5|GH18,null,CBM5|CBM73|GH19
|
Aeromonas hydrophila |
| chitin | MGYG000002529 | MGYG000002529_25|CGC1 |
2.A.21.9.2,GH18|CBM5,CBM5,CBM73|CBM5|GH19,null,null,CBM73|GH18|CBM5,CheW+Response_reg,null,3.A.1.122.15,3.A.1.122.15
|
Aeromonas veronii |
| chitin | MGYG000002583 | MGYG000002583_2|CGC3 |
3.A.1.121.4,null,null,GH0|GH94|GT84,null,GH0|GH94|GT84,GH0|GH94|GT84
|
CAG-492 sp000434015 |
| chitin | MGYG000002836 | MGYG000002836_8|CGC1 |
3.A.1.135.6,3.A.1.135.6,MarR,null,GH94|GT84,GH94|GH0|GT84,null,2.A.50.2.1
|
Anaerocolumna aminovalerica |
| chitin | MGYG000002836 | MGYG000002836_8|CGC2 |
CBM12|GH23,GH18|CBM12,null,2.A.23.1.8
|
Anaerocolumna aminovalerica |
| chitin | MGYG000003115 | MGYG000003115_5|CGC1 |
3.A.1.113.3,null,null,CBM73|GH18|CBM5,GH18|CBM5,3.A.15.1.1,null,null,3.A.15.1.1,3.A.15.1.1,null,3.A.15.1.1,3.A.15.1.1
|
Franconibacter helveticus |
| chitin | MGYG000003187 | MGYG000003187_7|CGC1 |
GH19|CBM73|CBM5,GH23,GH18|CBM5,3.A.15.2.1,null,null,3.A.15.1.1,3.A.15.3.1,null,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,3.A.15.1.1,1.B.22.1.1
|
Leclercia adecarboxylata_C |
| chitin | MGYG000003615 | MGYG000003615_90|CGC2 |
CBM5|GH19,GH20,null,GH94,null,CBM5|GH18,null,null,3.A.1.1.42,3.A.1.1.29,null,8.A.59.2.1,SBP_bac_1,HTH_AraC+HTH_AraC,CE9
|
CAG-791 sp900315055 |
| chitin | MGYG000003669 | MGYG000003669_184|CGC1 |
GH94|GH0|GT84,GH94|GT84,null,GH94|GH0|GT84,3.A.7.7.1
|
UMGS1933 sp900772235 |
| chitin | MGYG000003939 | MGYG000003939_9|CGC1 |
GH15,null,null,3.A.12.1.1,GH94|GH0|GT84,GH94|GH0|GT84
|
CAG-269 sp900556865 |
| chitin | MGYG000004494 | MGYG000004494_10|CGC1 |
GH0|GT84|GH94,null,3.A.1.137.2,TetR_N,3.A.1.122.14,3.A.1.137.2,HATPase_c,2.A.5.5.2
|
CAG-269 sp000437215 |
| chitin | MGYG000004667 | MGYG000004667_51|CGC1 |
4.A.1.2.11,GH1,GH18|GH23|CBM5,GH18|CBM5,Sigma70_r2,GH16_3|GH16|CBM12,GH18|CBM16|CBM12,CBM56|GH64
|
Clostridium beijerinckii |