| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29739.m003719 |
| Family | GH35 |
| Protein Properties | Length: 775 Molecular Weight: 86459.9 Isoelectric Point: 8.4649 |
| Chromosome | Chromosome/Scaffold: 29739 Start: 1006645 End: 1010844 |
| Description | beta-galactosidase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 176 | 273 | 3.7e-37 |
| KPNNPKSPKMFTENWSGWYKLWGGKTSYRTAEDMAFSVARFVQAGGVFNNYYMYYGGTNFGRTAGGPYITASYDYDSPLDEYGNLNQPKWGHLKQLHA | |||
| GH35 | 32 | 146 | 0 |
| LIINGERKIIFSGAIHYPRSTPEMWPELINKAKDGGLDAIETYVFWDRHEPVRRQYDFSGNLDIVKFFRVIQEAGLYVILRIGPYVCAEWNYGGFPMWLH NTPGVELRTDNEIYK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 775 Download |
| MLSGWIDIVL ISTLALLSLC SATTVEYDSN ALIINGERKI IFSGAIHYPR STPEMWPELI 60 NKAKDGGLDA IETYVFWDRH EPVRRQYDFS GNLDIVKFFR VIQEAGLYVI LRIGPYVCAE 120 WNYGGFPMWL HNTPGVELRT DNEIYKVPLL IFFVSNNVRI VSQINTCNGY YCDTFKPNNP 180 KSPKMFTENW SGWYKLWGGK TSYRTAEDMA FSVARFVQAG GVFNNYYMYY GGTNFGRTAG 240 GPYITASYDY DSPLDEYGNL NQPKWGHLKQ LHASIKLGEK IITNGTVTIK NFQAGVDLTA 300 YTNNATRERF CFLSNINIAD AHIDLQQDGN YTIPAWSVSI LQNCSKEIFN TAKVNTQTSL 360 MVKKLYENDK PTNLSWVWAP EPMKDTLLGK GRFRTSQLLD QKETTVDASD YLWYMTSFDM 420 NKNTLQWTNV TLRVTSRGHV LHAYVNKKLI VGSQLVIQGE FTFEKPVTLK PGNNVISLLS 480 ATVGLANYGS FFDKTPVGIV DGPVQLMANG KPVMDLSSNL WSYKIGLNGE AKRFYDPTSR 540 HNKWSAANGV STARPMTWYK TTFSSPSGTD PVVVDLQGMG KGHAWANGKS LGRYWPSQIA 600 NANGCSGTCD YRGPYNAGKC TRNCGIPTQR WYHVPRSFLN SNGKNTLILF EEVGGDPSGI 660 SFQIVTTETI CGNAYEGSTL ELSCQGGRTI SEIQFASYGN PQGTCSSFKK GSFDAMNSVQ 720 MVQKECVGKD SCSIIASDET FMVNEPQGIS NKRLAVQAHC SNSQEVASKR QNKKV 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 7.0e-18 | 27 | 131 | 107 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 1.0e-52 | 27 | 152 | 126 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-96 | 31 | 275 | 321 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 3.0e-170 | 164 | 761 | 629 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002324727.1 | 1.4013e-45 | 55 | 152 | 1 | 98 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324727.1 | 0 | 164 | 724 | 172 | 744 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326135.1 | 0 | 162 | 761 | 229 | 824 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516236.1 | 0 | 1 | 775 | 1 | 775 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002516256.1 | 0 | 9 | 760 | 31 | 848 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4e8d_B | 3e-30 | 30 | 259 | 8 | 314 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 4e8d_A | 3e-30 | 30 | 259 | 8 | 314 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 4e8c_B | 3e-30 | 30 | 259 | 8 | 314 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
