| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29842.m003588 |
| Family | CBM53 |
| Protein Properties | Length: 1095 Molecular Weight: 124688 Isoelectric Point: 6.4935 |
| Chromosome | Chromosome/Scaffold: 29842 Start: 421043 End: 430725 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM53 | 184 | 267 | 3.4e-32 |
| QDIEVYLNRSLSTLNNEPDVFIMGAFNDWRWKSFTIRLNKTHLKGDWWSCQVHVPKEAYKMDFVFFNGKNVYDNNDKKDFCTAV | |||
| CBM53 | 389 | 477 | 1.4e-32 |
| LVRLYYNKSSGPLAHAKDIWIHGGCNNWSDGLSIVEKLICSERKDGEWWYAKVLVPDRAIILDWVFADGPPQSAIVYDNNQRQDFHAIV | |||
| CBM53 | 550 | 637 | 3.9e-33 |
| KDATVFYNPANTVLNGKSEVWFRGSFNRWTHRNGPLPPLKMVSADNGSHVKATVKVPLDAYMMDFVFSEKEEGGTFDNKDGVDYHVPV | |||
| GT5 | 648 | 1091 | 0 |
| HIVHVAVEMAPIAKVGGLGDVVTSLSRAVQDLNHSVDIILPKYDCMNLTHVKDIHYQKSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWTGCIYGCRND GERFGFFCHAALEFLQQSGFHPDIIHCHDWSSAPVAWLFKDHYMHYGLSKARVVFTIHNLEFGANNIGRAMAYSDMATTVSPTYSREVAGNSAIAPHLHK FHGILNGIDPDIWDPYNDKFIPVTYTSENVVEGKRAAKEALQQRLGLKKADLPLIGIITRLTHQKGIHLIKHAIWRTLDRNGQVVLLGSAPDPRIQNDFV NLANQLHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGT DYALNRAISAWYDGRGWFNSLCKTVMQQDWSWNKPALDYMELYH | |||
| Full Sequence |
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| Protein Sequence Length: 1095 Download |
| MSTAKSRGPA PEGFTLKTPA GTSTQKRNLQ NNGDKEDSVT LTSSEIVGTN KKTPETKDHI 60 DEEQEFELTV DKKVIEEKVT EDVPLSLAKS NQAMENGSVG NVGNVNMSAD EIAREERQFD 120 NLKSDRFVKE EGFGTDDKEI EDTSLKLKLE MEEKRKQEIE GLAEYSFSRG NKLFIYPLVV 180 KPDQDIEVYL NRSLSTLNNE PDVFIMGAFN DWRWKSFTIR LNKTHLKGDW WSCQVHVPKE 240 AYKMDFVFFN GKNVYDNNDK KDFCTAVEGG MDALTFDDFL LEEKRRELDK LAKEQAERER 300 QXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX KAASEADKAH AKVEIEKRRE 360 ILHQSMKKAS SPIDNVWYIR PTEFKGEDLV RLYYNKSSGP LAHAKDIWIH GGCNNWSDGL 420 SIVEKLICSE RKDGEWWYAK VLVPDRAIIL DWVFADGPPQ SAIVYDNNQR QDFHAIVPKS 480 VPTELFWVEE EHRIYRKLQE ERRLREEAIR AKAEKTAHMK AERKERTLKR FLLSQKHIVY 540 TDPLDVQAGK DATVFYNPAN TVLNGKSEVW FRGSFNRWTH RNGPLPPLKM VSADNGSHVK 600 ATVKVPLDAY MMDFVFSEKE EGGTFDNKDG VDYHVPVFGG IAKEPPMHIV HVAVEMAPIA 660 KVGGLGDVVT SLSRAVQDLN HSVDIILPKY DCMNLTHVKD IHYQKSYSWG GTEIKVWFGK 720 VEGLSVYFLE PQNGMFWTGC IYGCRNDGER FGFFCHAALE FLQQSGFHPD IIHCHDWSSA 780 PVAWLFKDHY MHYGLSKARV VFTIHNLEFG ANNIGRAMAY SDMATTVSPT YSREVAGNSA 840 IAPHLHKFHG ILNGIDPDIW DPYNDKFIPV TYTSENVVEG KRAAKEALQQ RLGLKKADLP 900 LIGIITRLTH QKGIHLIKHA IWRTLDRNGQ VVLLGSAPDP RIQNDFVNLA NQLHSSHADR 960 ARLCLTYDEP LSHLIYAGAD FILVPSIFEP CGLTQLTAMR YGSIPVVRKT GGLYDTVFDV 1020 DHDKERAQAQ GLEPNGFSFD GADAAGTDYA LNRAISAWYD GRGWFNSLCK TVMQQDWSWN 1080 KPALDYMELY HAARK |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 1.0e-147 | 647 | 1093 | 493 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 3.0e-155 | 647 | 1093 | 490 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 1.0e-170 | 647 | 1095 | 488 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-178 | 648 | 1091 | 493 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 1 | 1095 | 1097 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 647 | 1091 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 647 | 1091 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 647 | 1091 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 647 | 1091 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 647 | 1091 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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