Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30068.m002598 |
Family | GT5 |
Protein Properties | Length: 526 Molecular Weight: 57802.3 Isoelectric Point: 7.4484 |
Chromosome | Chromosome/Scaffold: 30068 Start: 567886 End: 571011 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 81 | 201 | 2.6e-30 |
LVFVGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTVSPRYDQYKDAWDTCVLVEITVGDRVETIRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKIYG PTAGLDYKDNQLRFSLLCLVA | |||
GT5 | 200 | 512 | 0 |
VAFCIHNIAYQGRFAFSDFSLLNLPDQFKSSFDFIDGYDKPVNGRKINWMKAGVLESDRVLTVSPYYAEEVISGVERGVELDNIIRKTGISGIINGMDVQ EWNPATDKYIGINYDATTVTEAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLAKYNVQIVILGTGKKAFEKQIEQLEVLYPDKCR GVAKFNVPLAHMIIAGADFMLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVNEGYTGFQMGAFHVECDRVDPADVAAVVRTVVRALATYATAALKE MVLNCMAQDFSWX |
Full Sequence |
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Protein Sequence Length: 526 Download |
MASTVTAAAQ FVSRSSQLNS HESSQTGMKS QSITHNGLRS VNMVDKLQMR SLATKAGKKV 60 PSAVQKDRPS CSIVCGQGMN LVFVGAEVGP WSKTGGLGDV LGGLPPALAA RGHRVMTVSP 120 RYDQYKDAWD TCVLVEITVG DRVETIRFFH CYKRGVDRVF VDHPMFLEKV WGKTGSKIYG 180 PTAGLDYKDN QLRFSLLCLV AFCIHNIAYQ GRFAFSDFSL LNLPDQFKSS FDFIDGYDKP 240 VNGRKINWMK AGVLESDRVL TVSPYYAEEV ISGVERGVEL DNIIRKTGIS GIINGMDVQE 300 WNPATDKYIG INYDATTVTE AKPLLKEALQ AEVGLPVDRN IPLIGFIGRL EEQKGSDILV 360 AAISQLAKYN VQIVILGTGK KAFEKQIEQL EVLYPDKCRG VAKFNVPLAH MIIAGADFML 420 IPSRFEPCGL IQLHAMRYGT VPIVASTGGL VDTVNEGYTG FQMGAFHVEC DRVDPADVAA 480 VVRTVVRALA TYATAALKEM VLNCMAQDFS WXXXXXXXXX XXXXEP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 6.0e-66 | 179 | 511 | 385 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 4.0e-86 | 79 | 511 | 491 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-105 | 79 | 511 | 487 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-142 | 80 | 511 | 487 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 5.0e-143 | 79 | 511 | 480 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 3 | 511 | 2 | 568 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | ACM78591.1 | 0 | 3 | 511 | 2 | 576 | granule-bound starch synthase [Nelumbo nucifera] |
Swiss-Prot | Q00775 | 0 | 3 | 511 | 2 | 568 | SSG1_SOLTU RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
Swiss-Prot | Q43784 | 0 | 1 | 511 | 1 | 569 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
RefSeq | XP_002518931.1 | 0 | 1 | 511 | 1 | 511 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 79 | 511 | 10 | 497 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3vue_A | 0 | 79 | 511 | 10 | 497 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 0 | 79 | 454 | 1 | 404 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0 | 79 | 454 | 1 | 404 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0 | 79 | 454 | 1 | 404 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 570 | 3 | 511 | 0 |
HO629148 | 539 | 27 | 511 | 0 |
HO825853 | 480 | 87 | 511 | 0 |
ES796214 | 317 | 195 | 511 | 0 |
DV999997 | 311 | 200 | 510 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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