| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30336.m000014 |
| Family | GH74 |
| Protein Properties | Length: 384 Molecular Weight: 40876.6 Isoelectric Point: 5.8304 |
| Chromosome | Chromosome/Scaffold: 30336 Start: 26 End: 1177 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH74 | 104 | 216 | 5.9e-24 |
| EGFYHGSETMALDPNDDQRVYMSAGMYNWASSHARLYISTDRGSHWTHVDLPFPAGGNNQGRAIGERLMVDPNDSRILFYATRTAGLWKSSDRGQTWNQV TSLSTLTMTQAQI | |||
| Full Sequence |
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| Protein Sequence Length: 384 Download |
| MHKMRLLALA GVVAGLAAGC GGSDADHGNG QTVLAGTIGS ASPTIQPARF ASVKFGGGGY 60 VPGLIFHPTS PDVLYARTDV GGAYRWDPAT SSWIAITDMF GPDEGFYHGS ETMALDPNDD 120 QRVYMSAGMY NWASSHARLY ISTDRGSHWT HVDLPFPAGG NNQGRAIGER LMVDPNDSRI 180 LFYATRTAGL WKSSDRGQTW NQVTSLSTLT MTQAQIDTTY WSSPVGIEQV IFDTDTRGTG 240 TATQTIYTAV APDYANMAGL TAGLYKTTNG GASWTSIPVP ADVQGFIIPH MVRAKDGMMY 300 VAFTKGEGPG AGGPCRLYKF DGTNWTLLKG YDDTQWSSFG MGGLSVSGTG ANTRIALGVT 360 NTWGNWQGMP AVQLSDDGGA TWRE |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00602 | VPS10 | 0.0001 | 125 | 200 | 79 | + VPS10 domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002537904.1 | 0 | 1 | 384 | 1 | 384 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_001811482.1 | 0 | 45 | 384 | 54 | 383 | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase [Burkholderia ambifaria MC40-6] |
| RefSeq | ZP_02380465.1 | 0 | 45 | 384 | 24 | 353 | cellulosome enzyme, dockerin type I [Burkholderia ubonensis Bu] |
| RefSeq | ZP_03270662.1 | 0 | 50 | 384 | 53 | 379 | glycosyl hydrolase BNR repeat-containing protein [Burkholderia sp. H160] |
| RefSeq | ZP_04941481.1 | 0 | 1 | 384 | 37 | 417 | conserved hypothetical protein [Burkholderia cenocepacia PC184] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cn2_D | 0 | 60 | 383 | 24 | 341 | A Chain A, Crystal Structures Of Clostridium Thermocellum Xyloglucanase |
| PDB | 2cn2_C | 0 | 60 | 383 | 24 | 341 | A Chain A, Crystal Structures Of Clostridium Thermocellum Xyloglucanase |
| PDB | 2cn2_B | 0 | 60 | 383 | 24 | 341 | A Chain A, Crystal Structures Of Clostridium Thermocellum Xyloglucanase |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FP074520 | 147 | 65 | 207 | 7e-26 |
| FN025813 | 79 | 35 | 111 | 2.5 |
| FN025814 | 79 | 35 | 111 | 2.6 |
| BQ411784 | 82 | 44 | 123 | 2.9 |
| GD098830 | 79 | 35 | 111 | 3 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Ricinus communis | 33862.m000014 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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