| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30715.m000014 |
| Family | GT27 |
| Protein Properties | Length: 531 Molecular Weight: 60120.4 Isoelectric Point: 6.7919 |
| Chromosome | Chromosome/Scaffold: 30715 Start: 15 End: 1607 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT27 | 58 | 303 | 1.6e-24 |
| SVIIPTYGNLPHTLSCVRSIAEHMPAVPIEVIVAEDVSGDANILRMKQIPGLRFIENPKNLGFVRCCNYAATHARGEYVFFLNNDTEVTPGWLDTMLAVF ESREDCGMVGSKLVYPDGRLQEAGGILWKDASAWNYGRLDDASKSRYNYVRETDYASGASLLIKRDFFDKLGGFDELYVPAYCEDSDLAFKVRQAGKKLY YQPASVIVHYEGISNGTDTASGVKAYQVENQKKFHERWRSVLESQH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MVFRVAGPLF EGVVYYETWK RKGQPLPQIL GRGPIAIEKA DEVIAGLSLP EVASPRVSVI 60 IPTYGNLPHT LSCVRSIAEH MPAVPIEVIV AEDVSGDANI LRMKQIPGLR FIENPKNLGF 120 VRCCNYAATH ARGEYVFFLN NDTEVTPGWL DTMLAVFESR EDCGMVGSKL VYPDGRLQEA 180 GGILWKDASA WNYGRLDDAS KSRYNYVRET DYASGASLLI KRDFFDKLGG FDELYVPAYC 240 EDSDLAFKVR QAGKKLYYQP ASVIVHYEGI SNGTDTASGV KAYQVENQKK FHERWRSVLE 300 SQHFDNGTNV AAASERSAHR QTVLIVDHYV PQPDRDAGSR SVVCFIRVLL EMGLNVKFWP 360 QNLWYDEAYV RPLQQMGVEV FYGPEFLDGF DAWLETTDLR LDYVLLNRPH VSESFIKPLR 420 KFRPNAKLLY YGHDLHFARL QKEFEVSGNQ KLLRQAETEK SREMAIWNAV DVVYYPSQAE 480 TDTVLQMAPK VNARTLPPYF FGRRPKLDTA KEPCRAQSYP SSVAGFGHPP N 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd02525 | Succinoglycan_BP_ExoA | 4.0e-19 | 56 | 267 | 220 | + ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. | ||
| COG1215 | COG1215 | 2.0e-19 | 48 | 272 | 232 | + Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | ||
| pfam00535 | Glycos_transf_2 | 4.0e-21 | 58 | 229 | 176 | + Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. | ||
| cd04186 | GT_2_like_c | 6.0e-43 | 59 | 268 | 213 | + Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. | ||
| COG1216 | COG1216 | 2.0e-48 | 55 | 273 | 226 | + Predicted glycosyltransferases [General function prediction only] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBL41636.1 | 0 | 47 | 531 | 391 | 874 | Predicted glycosyltransferases [Clostridiales sp. SS3/4] |
| RefSeq | XP_002536504.1 | 0 | 1 | 531 | 1 | 531 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_294944.1 | 0 | 1 | 531 | 396 | 928 | glycosyl transferase family protein [Ralstonia eutropha JMP134] |
| RefSeq | ZP_03761549.1 | 0 | 55 | 531 | 661 | 1136 | hypothetical protein CLOSTASPAR_05582 [Clostridium asparagiforme DSM 15981] |
| RefSeq | ZP_06347989.1 | 0 | 38 | 531 | 434 | 928 | glycosyl transferase, family 2:Glycosyl transferase, group 1 [Clostridium sp. M62/1] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d7r_A | 0.0000006 | 40 | 266 | 85 | 337 | A Chain A, Ca-Like Domain Of Mouse Ptprg |
| PDB | 2d7i_A | 0.0000006 | 40 | 266 | 85 | 337 | A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ |
| PDB | 2ffv_B | 0.0000007 | 52 | 266 | 63 | 289 | A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ |
| PDB | 2ffv_A | 0.0000007 | 52 | 266 | 63 | 289 | A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ |
| PDB | 2ffu_A | 0.0000007 | 52 | 266 | 63 | 289 | P Chain P, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 |
| Hydropathy |
|---|
 |