| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 35540.m000016 |
| Family | GH115 |
| Protein Properties | Length: 467 Molecular Weight: 52290.5 Isoelectric Point: 7.2994 |
| Chromosome | Chromosome/Scaffold: 35540 Start: 9 End: 1410 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH115 | 84 | 467 | 0 |
| VIAANGGATTIVLGKDEHEGVLRAARDLQRDIGSVTGATPKSVTGAAPAEQDLIIAGTLGRNPLIDQLAKRGKLDVDQLAGQWEGFVIQAVRDPMPGVKR ALVIAGSDKRGTIYGIYSLSEQIGVSPWYWWADVPVQKHVALSVPLTTRIAEKPTVQYRGIFLNDEAPALTNWAKQHFGGFNHAFYERLFELMLRMRANY LWPAMWYSSFYDDDKENGPLADRMGIVMGTSHHEPMMRSQQEWHRYGKGVWDYQRNRDALREFWAGGLRNARDQEKVITMAMRGDGDEPMSENANVDLLQ NIVSDQRALIRQELGKEPQQVPQLWALYKEVQDYYEKGMRVPDDMLLLWCDDNWGNIRRLPTAEERKRSGGAGIYYHFDYVGVP | |||
| Full Sequence |
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| Protein Sequence Length: 467 Download |
| MWRSPLDSND CAIIKTIKPG SAPPLNGGTM TPELRYLATS SYSAWRRAIV ARLALAAILC 60 VGSAAAHAIG TQRFVKVDQV DGVVIAANGG ATTIVLGKDE HEGVLRAARD LQRDIGSVTG 120 ATPKSVTGAA PAEQDLIIAG TLGRNPLIDQ LAKRGKLDVD QLAGQWEGFV IQAVRDPMPG 180 VKRALVIAGS DKRGTIYGIY SLSEQIGVSP WYWWADVPVQ KHVALSVPLT TRIAEKPTVQ 240 YRGIFLNDEA PALTNWAKQH FGGFNHAFYE RLFELMLRMR ANYLWPAMWY SSFYDDDKEN 300 GPLADRMGIV MGTSHHEPMM RSQQEWHRYG KGVWDYQRNR DALREFWAGG LRNARDQEKV 360 ITMAMRGDGD EPMSENANVD LLQNIVSDQR ALIRQELGKE PQQVPQLWAL YKEVQDYYEK 420 GMRVPDDMLL LWCDDNWGNI RRLPTAEERK RSGGAGIYYH FDYVGVP |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3661 | AguA | 0.008 | 98 | 206 | 109 | + Alpha-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam03648 | Glyco_hydro_67N | 2.0e-10 | 107 | 202 | 96 | + Glycosyl hydrolase family 67 N-terminus. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the N-terminal region of alpha-glucuronidase. The N-terminal domain forms a two-layer sandwich, each layer being formed by a beta sheet of five strands. A further two helices form part of the interface with the central, catalytic, module (pfam07488). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0045493 | xylan catabolic process |
| GO:0046559 | alpha-glucuronidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN58880.1 | 0 | 66 | 467 | 32 | 436 | hypothetical protein AKSOIL_0265 [uncultured bacterium BLR13] |
| RefSeq | XP_002537027.1 | 0 | 1 | 467 | 1 | 467 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_001821216.1 | 0 | 53 | 467 | 17 | 433 | hypothetical protein Oter_4344 [Opitutus terrae PB90-1] |
| RefSeq | ZP_03016616.1 | 0 | 72 | 467 | 41 | 433 | hypothetical protein BACINT_04223 [Bacteroides intestinalis DSM 17393] |
| RefSeq | ZP_03679047.1 | 0 | 72 | 467 | 10 | 402 | hypothetical protein BACCELL_03402 [Bacteroides cellulosilyticus DSM 14838] |
| Transmembrane Domains | |
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| Start | End |
| 48 | 70 |
| Hydropathy |
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