| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 45228.m000013 |
| Family | CBM51 |
| Protein Properties | Length: 303 Molecular Weight: 31954.3 Isoelectric Point: 7.8189 |
| Chromosome | Chromosome/Scaffold: 45228 Start: 29 End: 940 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM51 | 176 | 297 | 1.9e-26 |
| AGWGGARADSTPYNQPLQVGGHGYGAGIGVLGNSRLQVRNQGYGLVRAEVGVDDSATDREHAVTFLVYGDGKLLAQSRPHRWGEAAQVLQAPVAGVKLIE LVARSAATVNEQLPVTWGDAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 303 Download |
| MLNAPLMLGA DLRAMAQPLM DIVGNADIIA LNQDAAGNQA TLAYDADDLQ ILVKQLASGQ 60 KAVALFNRGL APIDADLTAA HLKLRADAPI RLTDLWSKDN TTFTGQTKVR VAPRETRIFR 120 VDGARVLAQG LYLSELPGSV NPAADGVTRP LADPMIFRSS AGWSGTKGVG ERPMYAGWGG 180 ARADSTPYNQ PLQVGGHGYG AGIGVLGNSR LQVRNQGYGL VRAEVGVDDS ATDREHAVTF 240 LVYGDGKLLA QSRPHRWGEA AQVLQAPVAG VKLIELVARS AATVNEQLPV TWGDAALTTA 300 AGR |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00776 | NPCBM | 4.0e-5 | 217 | 298 | 82 | + This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. | ||
| PLN02229 | PLN02229 | 6.0e-8 | 1 | 102 | 105 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 3.0e-10 | 1 | 119 | 122 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 7.0e-11 | 1 | 96 | 98 | + alpha-galactosidase | ||
| pfam08305 | NPCBM | 4.0e-18 | 174 | 298 | 128 | + NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002539720.1 | 0 | 1 | 303 | 1 | 303 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| RefSeq | YP_001681948.1 | 0 | 1 | 297 | 336 | 634 | Alpha-galactosidase [Caulobacter sp. K31] |
| RefSeq | YP_001684037.1 | 0 | 1 | 297 | 333 | 629 | Alpha-galactosidase [Caulobacter sp. K31] |
| RefSeq | ZP_01301600.1 | 0 | 1 | 297 | 334 | 629 | putative secreted alpha-galactosidase [Sphingomonas sp. SKA58] |
| RefSeq | ZP_06120677.1 | 0 | 1 | 297 | 336 | 631 | Alpha-galactosidase [Caulobacter segnis ATCC 21756] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0.0000000000006 | 4 | 119 | 242 | 357 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a23_B | 0.0000004 | 4 | 138 | 264 | 400 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a23_A | 0.0000004 | 4 | 138 | 264 | 400 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a22_B | 0.0000004 | 4 | 138 | 264 | 400 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a22_A | 0.0000004 | 4 | 138 | 264 | 400 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| Hydropathy |
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