| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 48611.m000014 |
| Family | GH92 |
| Protein Properties | Length: 314 Molecular Weight: 35490.9 Isoelectric Point: 5.4055 |
| Chromosome | Chromosome/Scaffold: 48611 Start: 16 End: 957 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH92 | 1 | 314 | 0 |
| MLPVWSNSGNENWCMSGYHSVAVIADAVIKGNVNFDANKALDACVATARHRDYEGIGEYMDKGYIPDEKSGVSVSSTLEYAFDDWAIAQLAKKLNRNDIY EEFIKRSENYKNVYDPSVGFMRPKLVSGSFRTKFDPLSTINEGFIEGNSWNYTLFAPQDPESLIKLMGGDKRFVRYLDSLFTMNLPDKYFAETEDITRDG IIGNYVHGNEPSHHVAYLYNWTDKPWKTQERVRMILPMMYKPTPDGLGGNDDTGQMSAWYIFTSLGFYPVAPGSDQYSTGSPAVDHAVINLDNGKKFTIN VKNQSAKNVYVQKM | |||
| Full Sequence |
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| Protein Sequence Length: 314 Download |
| MLPVWSNSGN ENWCMSGYHS VAVIADAVIK GNVNFDANKA LDACVATARH RDYEGIGEYM 60 DKGYIPDEKS GVSVSSTLEY AFDDWAIAQL AKKLNRNDIY EEFIKRSENY KNVYDPSVGF 120 MRPKLVSGSF RTKFDPLSTI NEGFIEGNSW NYTLFAPQDP ESLIKLMGGD KRFVRYLDSL 180 FTMNLPDKYF AETEDITRDG IIGNYVHGNE PSHHVAYLYN WTDKPWKTQE RVRMILPMMY 240 KPTPDGLGGN DDTGQMSAWY IFTSLGFYPV APGSDQYSTG SPAVDHAVIN LDNGKKFTIN 300 VKNQSAKNVY VQKM |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01180 | aman2_put | 7.0e-68 | 2 | 313 | 327 | + alpha-1,2-mannosidase, putative. The identification of members of this family as putative alpha-1,2-mannosidases is based on an unpublished characterization of the aman2 gene in Bacillus sp. M-90 by Maruyama,Y., Nakajima,M. and Nakajima,T. (Genbank accession BAA76709, pid g4587313). Most members of this family appear to have signal sequences. Members from the dental pathogen Porphyromonas gingivalis have been described as immunoreactive with periodontitis patient serum [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG3537 | COG3537 | 5.0e-85 | 2 | 312 | 323 | + Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism] | ||
| pfam07971 | Glyco_hydro_92 | 4.0e-162 | 1 | 314 | 321 | + Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002539605.1 | 0 | 1 | 314 | 1 | 314 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_003092448.1 | 0 | 1 | 314 | 430 | 743 | alpha-1,2-mannosidase [Pedobacter heparinus DSM 2366] |
| RefSeq | YP_003126418.1 | 0 | 1 | 314 | 423 | 736 | alpha-1,2-mannosidase [Chitinophaga pinensis DSM 2588] |
| RefSeq | YP_003387173.1 | 0 | 1 | 314 | 415 | 728 | alpha-1,2-mannosidase [Spirosoma linguale DSM 74] |
| RefSeq | ZP_01882650.1 | 0 | 1 | 314 | 414 | 727 | putative sugar hydrolase [Pedobacter sp. BAL39] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wzs_H | 0 | 1 | 314 | 362 | 687 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
| PDB | 2wzs_G | 0 | 1 | 314 | 362 | 687 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
| PDB | 2wzs_F | 0 | 1 | 314 | 362 | 687 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
| PDB | 2wzs_E | 0 | 1 | 314 | 362 | 687 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
| PDB | 2wzs_D | 0 | 1 | 314 | 362 | 687 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
| Hydropathy |
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