| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 493691 |
| Family | GT4 |
| Protein Properties | Length: 836 Molecular Weight: 94976.4 Isoelectric Point: 6.5912 |
| Chromosome | Chromosome/Scaffold: 7 Start: 19838177 End: 19842815 |
| Description | sucrose synthase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 561 | 724 | 0 |
| DKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDPSKSKDREEISEIKKMHSLIEKYQLKGQFRWIAAQTDRTRNGELYRCIADTRGA FVQPAHYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIADFFEKS | |||
| Full Sequence |
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| Protein Sequence Length: 836 Download |
| MPSGSLGNGI PEAIGQNRGN IKRCLEKYIE NGRRVMKLNE LMDEMEIVIN DVMQRRRVME 60 GDLGKILCFT QEAVVIPPNV AFAVRGNPGI WQYTKVNSSN LSVEALSSTQ YFKLKELLFD 120 ENWANDENAL EVDFGALDFT LPWLSLPSSI GNGVSFVSSK LGSRLNDNPQ SLVDYLLSLE 180 HQGEKLMMNE TLNTARKLEM SLILADVFLS ELPKDTPFQA FELRFKEWGF EKGWGESAGR 240 VKETMRILSE ILQAPDPHNI DRFFARIPRI FNVVIFSVHG YFGQTDVLGL PDTGGQVVYI 300 LDQVKALEDE LLHRINSQGL NFKPQILVVT RLIPDAKNTK CNQELEPIFG TKHSNILRIP 360 FVTESGILRR WVSRFDIYPY LERFTKDATT KILDILEGKP DLIIGNYTDG NLVASLMANT 420 LGITQATIAH ALEKTKYEDS DIKWKEFDPK YHFSSQFTAD LISMNSADFI IASTYQEIAG 480 SKERVGQYES HMSFTLPGLY RVVSGINVFD PRFNIAAPGA DDTIYFPFTA QDRRFTKFYP 540 SIEELLFSQN ENDEHIGYLV DKKKPIIFSM ARLDVVKNLT GLTEWYAKNK RLRDLVNLVI 600 VGGFFDPSKS KDREEISEIK KMHSLIEKYQ LKGQFRWIAA QTDRTRNGEL YRCIADTRGA 660 FVQPAHYEAF GLTVIEAMSC GLVTFATNQG GPAEIIVDGV SGFHIDPSNG EESSDKIADF 720 FEKSGTDLDY WNMFSTEGLQ RINECYTWKI YANKVINMGS TYSYWRYLNK DQKLAKQRYI 780 HSFYNLQYRN LVKNIQILSD IPQPPPPPPK PLVKPSASKG SRRTQSRLSF RLFGA* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 1.0e-58 | 273 | 748 | 485 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 3.0e-114 | 272 | 755 | 484 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 800 | 803 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 18 | 795 | 782 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 5 | 548 | 547 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11375.1 | 0 | 1 | 801 | 45 | 854 | sucrose synthase [Arabidopsis thaliana] |
| EMBL | CBI27338.1 | 0 | 3 | 816 | 10 | 841 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_198534.2 | 0 | 1 | 835 | 3 | 836 | SUS5; UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
| RefSeq | XP_002267020.1 | 0 | 3 | 805 | 10 | 815 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270861.1 | 0 | 6 | 829 | 14 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 12 | 800 | 20 | 807 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
| PDB | 3s29_G | 0 | 12 | 800 | 20 | 807 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
| PDB | 3s29_F | 0 | 12 | 800 | 20 | 807 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
| PDB | 3s29_E | 0 | 12 | 800 | 20 | 807 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
| PDB | 3s29_D | 0 | 12 | 800 | 20 | 807 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 797 | 5 | 797 | 0 |
| BU103683 | 769 | 32 | 797 | 0 |
| HO778590 | 270 | 265 | 534 | 0 |
| HO778590 | 275 | 526 | 800 | 0 |
| HO778590 | 143 | 124 | 263 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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