| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 58058.m000013 |
| Family | GH17 |
| Protein Properties | Length: 287 Molecular Weight: 31533.7 Isoelectric Point: 10.7604 |
| Chromosome | Chromosome/Scaffold: 58058 Start: 44 End: 907 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 6 | 79 | 4.5e-24 |
| WKGETGWPSEGRQRETALPSRVNEARFIRGFVNLAEQNGWHYNLIEAFDQPWKRGSEGAVGGYWGLFDADRQDK | |||
| Full Sequence |
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| Protein Sequence Length: 287 Download |
| MTPVCWKGET GWPSEGRQRE TALPSRVNEA RFIRGFVNLA EQNGWHYNLI EAFDQPWKRG 60 SEGAVGGYWG LFDADRQDKG ILAGPVSNLP YWPQWLAFGA AVFVATLLIG GRVRSRRDAL 120 LLPLLGALAA CSIGAWGELA RVTSRDTGEW LWAGLLVGLN LLVLAHAALA LGERSGWRQG 180 VFAWLERRAG WLLVGTGFAG AVMMLELALD PRYRSFPSAA LLLPALAFLM RPVRAPRGET 240 ALLALIIGAG IVPQLYREGL QNPQAWGWAL VSVLMVAALW RSLRVRR |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 0.001 | 6 | 79 | 81 | + Glycosyl hydrolases family 17. | ||
| COG5309 | COG5309 | 9.0e-17 | 6 | 76 | 71 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002539906.1 | 0 | 1 | 287 | 1 | 287 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_001748164.1 | 0 | 8 | 287 | 241 | 520 | glycoside hydrolase family protein [Pseudomonas putida W619] |
| RefSeq | YP_258835.1 | 0 | 8 | 287 | 237 | 516 | glycosyl hydrolase, putative [Pseudomonas fluorescens Pf-5] |
| RefSeq | YP_347337.1 | 0 | 8 | 287 | 251 | 530 | glycoside hydrolase family protein [Pseudomonas fluorescens Pf0-1] |
| RefSeq | YP_607133.1 | 0 | 8 | 287 | 231 | 510 | beta (1-6) glucans synthase [Pseudomonas entomophila L48] |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 91 | 113 | ||||
| 120 | 140 | ||||
| 150 | 172 | ||||
| 189 | 208 | ||||
| 264 | 283 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GO554455 | 89 | 8 | 96 | 0 |
| CV920711 | 86 | 9 | 91 | 0.0000009 |
| CV952776 | 87 | 8 | 91 | 0.000001 |
| FG029090 | 87 | 8 | 91 | 0.000001 |
| GO800640 | 88 | 3 | 81 | 0.000002 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Picea abies | MA_159111g0370 | MA_159111g0350.51.304 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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