| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | AC233678_9.1 |
| Family | CBM43 |
| Protein Properties | Length: 170 Molecular Weight: 18227.7 Isoelectric Point: 4.1368 |
| Chromosome | Chromosome/Scaffold: 2336781 Start: 26026 End: 27783 |
| Description | plasmodesmata callose-binding protein 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 42 | 120 | 3.6e-30 |
| WCVAKNNAEDAALQTALDWACGAGGADCGPIQNGGPCYDVNSVQNTASYAFNDYFLKHGLTDDSCSFNNNAAVTSLNPS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 170 Download |
| MSDTQETLLV CFVFSDSLLL LLLLSPFCHG GSDGGAVKQE LWCVAKNNAE DAALQTALDW 60 ACGAGGADCG PIQNGGPCYD VNSVQNTASY AFNDYFLKHG LTDDSCSFNN NAAVTSLNPS 120 EFVFVYLSMV QFGFVLDLGY LEIGMHVMVI ASFHLGLDHS AWRLLIVKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-9 | 41 | 112 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-20 | 41 | 120 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM67357.1 | 3e-38 | 1 | 128 | 44 | 168 | unknown [Arabidopsis thaliana] |
| GenBank | ABK92983.1 | 6e-38 | 26 | 124 | 21 | 118 | unknown [Populus trichocarpa] |
| RefSeq | NP_567060.1 | 1e-38 | 1 | 128 | 3 | 127 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002279275.1 | 9.99995e-41 | 35 | 120 | 29 | 114 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326029.1 | 6e-39 | 19 | 120 | 14 | 114 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000004 | 42 | 120 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
