| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G64760.1 |
| Family | CBM43 |
| Protein Properties | Length: 482 Molecular Weight: 52281.4 Isoelectric Point: 4.8186 |
| Chromosome | Chromosome/Scaffold: 1 Start: 24054173 End: 24056414 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 366 | 447 | 7.9e-24 |
| WCTFNPEAKDLTKLAANIDYACTFSDCTALGYGSSCNTLDANGNASYAFNMFFQVKNQDESACYFQGLATITTQNISQGQCN | |||
| GH17 | 25 | 343 | 0 |
| LGVNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKS YNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAFFD GAEPINDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGDKHANAGSAYRFYNGLLPRLGTNKGTPLRPTYIEVYLFGLLDEDAKSIAPGP FERHWGIFKFDGQPKFPID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| MSNLLALVVG FVIVIGHLGI LVNGLGVNWG TMATHKLPPK TVVQMLKDNN INKVKLFDAD 60 ETTMGALAGS GLEVMVAIPN DQLKVMTSYD RAKDWVRKNV TRYNFDGGVN ITFVAVGNEP 120 FLKSYNGSFI NLTFPALANI QNALNEAGLG NSVKATVPLN ADVYDSPASN PVPSAGRFRP 180 DIIGQMTQIV DFLGKNNAPI TINIYPFLSL YGNDDFPLNY AFFDGAEPIN DNGIDYTNVF 240 DANFDTLVSS LKAVGHGDMP IIVGEVGWPT EGDKHANAGS AYRFYNGLLP RLGTNKGTPL 300 RPTYIEVYLF GLLDEDAKSI APGPFERHWG IFKFDGQPKF PIDLSGQGQS KFLIGAQNVP 360 YLPNKWCTFN PEAKDLTKLA ANIDYACTFS DCTALGYGSS CNTLDANGNA SYAFNMFFQV 420 KNQDESACYF QGLATITTQN ISQGQCNFPI QIVASSASSF SCSSYSLVVL IVWFLLSGMM 480 F* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 251 | 335 | 92 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-16 | 365 | 435 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-31 | 365 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-72 | 25 | 343 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0031225 | anchored to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38251.1 | 0 | 32 | 481 | 1 | 450 | AC006193_7 Similar to glucan endo-1,3-beta-glucosidase precursor [Arabidopsis thaliana] |
| GenBank | AAS99718.1 | 0 | 26 | 481 | 26 | 481 | At1g64760 [Arabidopsis thaliana] |
| RefSeq | NP_176656.1 | 0 | 26 | 481 | 26 | 481 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_179534.1 | 0 | 3 | 459 | 2 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277003.1 | 0 | 11 | 452 | 10 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 1.4013e-45 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
| PDB | 3f55_C | 1.4013e-45 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
| PDB | 3f55_B | 1.4013e-45 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
| PDB | 3f55_A | 1.4013e-45 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
| PDB | 3em5_D | 1.4013e-45 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
