| Basic Information | |
|---|---|
| Species | Aquilegia coerulea |
| Cazyme ID | Aquca_017_00095.1 |
| Family | CBM22 |
| Protein Properties | Length: 922 Molecular Weight: 102702 Isoelectric Point: 6.5425 |
| Chromosome | Chromosome/Scaffold: 17 Start: 623945 End: 628606 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 34 | 172 | 1.8e-30 |
| NIILNHDFSLGLESWHLNCCYGHVASADSGSLKGVSAKTGANYAVIHNRKECWQGLEQDITSKVSPGATYYVSAWVGVAGSIQGATDVLATLKLEYKNSS TKYLFLGRTSVLKDRWEKLEATFSLETLPDRLVFYLEGP | |||
| CBM22 | 207 | 343 | 7e-33 |
| NIILNPQFEDGLNNWSGRGCKIVQHDSMGDGKIVPSSGKFFAAATDRTQSWNGIQQDITGRVQRKLAYEMTAMVRIFGNNITTATVQATLWVQIPNQREQ YIGIANLQASDKEWVQLQGKFLLNSSPSKVVIYLEGP | |||
| CBM22 | 378 | 519 | 1.19951e-42 |
| NIIQNSNLSDNLTGWFPLGQCKLSVGTGSPHLLPPMARESLGPHGPLSGRHILVTNRTQTWMGPAQMITDNVKLYLTYQVSAWVHIGSGASGAQNVNIAL GVDNQWVNGGQVEVADHRWHEIGGSFRIEKQPSKIMVYIQGP | |||
| GH10 | 577 | 861 | 0 |
| QIQNSFPFGSCISRTNIDNEDFVNFFVKNFNWAVFGNELKWYWTEAQQGILNYTDADELLDLCKKYNIDVRGHCIFWEVENTVQSWLKSLNKNDLMTAVQ NRLMGLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRSNMFKTANQLDPSATLFVNDYHVEDGCDTRSSPEKYIQQILDLQEQGAPVGGIGIQGHIDSP VGPIVCSALDKLGILGLPIWFTELDVSSINEYIRGDDLEVMLREAFAHPAVEGIMLWGFWELFMSRENSHLVDAEGNVNEAGNRY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 922 Download |
| MCARISISTI HLETLLLLKF QIILLWIKTS IAGNIILNHD FSLGLESWHL NCCYGHVASA 60 DSGSLKGVSA KTGANYAVIH NRKECWQGLE QDITSKVSPG ATYYVSAWVG VAGSIQGATD 120 VLATLKLEYK NSSTKYLFLG RTSVLKDRWE KLEATFSLET LPDRLVFYLE GPSPGIDLLV 180 DSVVISSSSL RGIETTNGVC LTDGDENIIL NPQFEDGLNN WSGRGCKIVQ HDSMGDGKIV 240 PSSGKFFAAA TDRTQSWNGI QQDITGRVQR KLAYEMTAMV RIFGNNITTA TVQATLWVQI 300 PNQREQYIGI ANLQASDKEW VQLQGKFLLN SSPSKVVIYL EGPPPGTDIL VNSLVVKYAS 360 KLPPSPRPVI ENAAFGVNII QNSNLSDNLT GWFPLGQCKL SVGTGSPHLL PPMARESLGP 420 HGPLSGRHIL VTNRTQTWMG PAQMITDNVK LYLTYQVSAW VHIGSGASGA QNVNIALGVD 480 NQWVNGGQVE VADHRWHEIG GSFRIEKQPS KIMVYIQGPS AGVDLMVADL HIFPVDRRAR 540 FKHLRNQTDK IRKRDVVLKF SGLDASSSFG TFVNVRQIQN SFPFGSCISR TNIDNEDFVN 600 FFVKNFNWAV FGNELKWYWT EAQQGILNYT DADELLDLCK KYNIDVRGHC IFWEVENTVQ 660 SWLKSLNKND LMTAVQNRLM GLLTRYKGKF RHYDVNNEML HGSFYQDRLG KDIRSNMFKT 720 ANQLDPSATL FVNDYHVEDG CDTRSSPEKY IQQILDLQEQ GAPVGGIGIQ GHIDSPVGPI 780 VCSALDKLGI LGLPIWFTEL DVSSINEYIR GDDLEVMLRE AFAHPAVEGI MLWGFWELFM 840 SRENSHLVDA EGNVNEAGNR YLALKREWLT HAHGHIDDQG QFCFRGFHGT YSVEVSTFTK 900 TINKTFVVYK DDSPLVLTID L* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 3.0e-17 | 207 | 347 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 2.0e-18 | 33 | 174 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 5.0e-34 | 560 | 835 | 301 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-76 | 578 | 865 | 308 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-77 | 615 | 860 | 267 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33301.1 | 0 | 30 | 921 | 26 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
| RefSeq | XP_002283550.1 | 0 | 28 | 921 | 88 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301133.1 | 0 | 30 | 921 | 160 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 34 | 527 | 2 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 206 | 532 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 7e-28 | 585 | 839 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 7e-28 | 585 | 839 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 1e-27 | 584 | 855 | 18 | 289 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 1e-27 | 584 | 855 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-27 | 584 | 855 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR931361 | 261 | 662 | 922 | 0 |
| DR932349 | 251 | 541 | 791 | 0 |
| DR924366 | 254 | 307 | 560 | 0 |
| DR924366 | 232 | 136 | 354 | 0.000000000000001 |
| DR932349 | 21 | 790 | 810 | 0.004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
