| Basic Information | |
|---|---|
| Species | Aquilegia coerulea |
| Cazyme ID | Aquca_017_00095.3 |
| Family | CBM22 |
| Protein Properties | Length: 689 Molecular Weight: 77237.7 Isoelectric Point: 6.7329 |
| Chromosome | Chromosome/Scaffold: 17 Start: 623945 End: 628606 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM22 | 8 | 110 | 6.9e-26 |
| PSSGKFFAAATDRTQSWNGIQQDITGRVQRKLAYEMTAMVRIFGNNITTATVQATLWVQIPNQREQYIGIANLQASDKEWVQLQGKFLLNSSPSKVVIYL EGP | |||
| CBM22 | 145 | 286 | 3.89561e-43 |
| NIIQNSNLSDNLTGWFPLGQCKLSVGTGSPHLLPPMARESLGPHGPLSGRHILVTNRTQTWMGPAQMITDNVKLYLTYQVSAWVHIGSGASGAQNVNIAL GVDNQWVNGGQVEVADHRWHEIGGSFRIEKQPSKIMVYIQGP | |||
| GH10 | 344 | 628 | 0 |
| QIQNSFPFGSCISRTNIDNEDFVNFFVKNFNWAVFGNELKWYWTEAQQGILNYTDADELLDLCKKYNIDVRGHCIFWEVENTVQSWLKSLNKNDLMTAVQ NRLMGLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRSNMFKTANQLDPSATLFVNDYHVEDGCDTRSSPEKYIQQILDLQEQGAPVGGIGIQGHIDSP VGPIVCSALDKLGILGLPIWFTELDVSSINEYIRGDDLEVMLREAFAHPAVEGIMLWGFWELFMSRENSHLVDAEGNVNEAGNRY | |||
| Full Sequence |
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| Protein Sequence Length: 689 Download |
| MGDGKIVPSS GKFFAAATDR TQSWNGIQQD ITGRVQRKLA YEMTAMVRIF GNNITTATVQ 60 ATLWVQIPNQ REQYIGIANL QASDKEWVQL QGKFLLNSSP SKVVIYLEGP PPGTDILVNS 120 LVVKYASKLP PSPRPVIENA AFGVNIIQNS NLSDNLTGWF PLGQCKLSVG TGSPHLLPPM 180 ARESLGPHGP LSGRHILVTN RTQTWMGPAQ MITDNVKLYL TYQVSAWVHI GSGASGAQNV 240 NIALGVDNQW VNGGQVEVAD HRWHEIGGSF RIEKQPSKIM VYIQGPSAGV DLMVADLHIF 300 PVDRRARFKH LRNQTDKIRK RDVVLKFSGL DASSSFGTFV NVRQIQNSFP FGSCISRTNI 360 DNEDFVNFFV KNFNWAVFGN ELKWYWTEAQ QGILNYTDAD ELLDLCKKYN IDVRGHCIFW 420 EVENTVQSWL KSLNKNDLMT AVQNRLMGLL TRYKGKFRHY DVNNEMLHGS FYQDRLGKDI 480 RSNMFKTANQ LDPSATLFVN DYHVEDGCDT RSSPEKYIQQ ILDLQEQGAP VGGIGIQGHI 540 DSPVGPIVCS ALDKLGILGL PIWFTELDVS SINEYIRGDD LEVMLREAFA HPAVEGIMLW 600 GFWELFMSRE NSHLVDAEGN VNEAGNRYLA LKREWLTHAH GHIDDQGQFC FRGFHGTYSV 660 EVSTFTKTIN KTFVVYKDDS PLVLTIDL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 2.0e-12 | 10 | 114 | 106 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 7.0e-14 | 144 | 288 | 151 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-34 | 327 | 602 | 301 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-77 | 345 | 632 | 308 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-78 | 382 | 627 | 267 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33301.1 | 0 | 1 | 688 | 228 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
| GenBank | AAX33301.1 | 5e-31 | 11 | 294 | 68 | 345 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
| GenBank | AAX33301.1 | 0.0000001 | 145 | 299 | 30 | 180 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
| RefSeq | XP_002301133.1 | 0 | 1 | 299 | 29 | 314 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 1 | 688 | 362 | 1049 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 3e-28 | 352 | 606 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 3e-28 | 352 | 606 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 7e-28 | 351 | 622 | 18 | 289 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 7e-28 | 351 | 622 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 9e-28 | 351 | 622 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR931361 | 261 | 429 | 689 | 0 |
| DR932349 | 251 | 308 | 558 | 0 |
| DR924366 | 254 | 74 | 327 | 0 |
| DR924366 | 114 | 8 | 121 | 0.000000006 |
| DR932349 | 21 | 557 | 577 | 0.004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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