| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032897 |
| Family | CBM57 |
| Protein Properties | Length: 629 Molecular Weight: 68827.4 Isoelectric Point: 8.5122 |
| Chromosome | Chromosome/Scaffold: 09 Start: 11993733 End: 11996608 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 212 | 361 | 1.1e-25 |
| DYRGDRWGGDRFWNPMRSFGEGGDSPRSTENTIKKASVSPNFYPEGLYQSALVSTDDQPDLTYSIDVEPNRNYSVWMHFAEIDATVTAEGKRVFDVVING DTFFEDVDVIKMSGGRYTALVLNATVAVSGRTLTVVLQPKGGGHAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MMMLRYTLAC LLIFSFGLTS SSARQAPYAL RISCGARHNV KTPPTYVLWY KDIAYTGGVP 60 ANATQPGYIT PPLKTLRYFP ISEGPNNCYN IVRVPKGHYS VRIFFGVVDQ PNFDKEPLFD 120 ISIEGTQIYS LKSGWSSHDD QVFAEARVFL MGGTSTICFH STGHGDPAIL SIEILQVDDK 180 AYYFGQGWGQ GMILRTAKRL TCGTGKPRFD EDYRGDRWGG DRFWNPMRSF GEGGDSPRST 240 ENTIKKASVS PNFYPEGLYQ SALVSTDDQP DLTYSIDVEP NRNYSVWMHF AEIDATVTAE 300 GKRVFDVVIN GDTFFEDVDV IKMSGGRYTA LVLNATVAVS GRTLTVVLQP KGGGHAIINA 360 IEVFEIITAE FKTLRDEVSA LQKMRKALGL PSRFGWNGDP CVPTQHPWSG ADCQLDKNTS 420 RWVIDGLDLD SQGLKGFLPN DISKLKHLQS INLSQNSIHG GIPASLGSIT KLEVLDLSYN 480 SFNGSIPETI GELTSLRILN LNGNSLSGKV PAAVGGMLLH RVRFNFTDNA GLCGIPGLPA 540 CGAHLSSGAK IGIAFGVSVA FLLLVLCALI WWKRRQNILR AQHIAARGAP YAKKRTNVSH 600 DIQMTRHGHN NNHGQARTAV ENGPSLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-14 | 427 | 538 | 112 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 1.0e-14 | 427 | 514 | 88 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-15 | 424 | 578 | 182 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 2.0e-66 | 32 | 366 | 355 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 2 | 628 | 627 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16758.1 | 0 | 2 | 626 | 1 | 624 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
| EMBL | CBI30598.1 | 0 | 25 | 628 | 22 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 2 | 628 | 1 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002305781.1 | 0 | 30 | 628 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 3 | 628 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.00000000000005 | 399 | 541 | 608 | 745 | A Chain A, Lip5(mit)2 |
| PDB | 3rj0_A | 0.0000000005 | 423 | 514 | 464 | 555 | A Chain A, Lip5(mit)2 |
| PDB | 3rj0_A | 0.000000007 | 413 | 514 | 386 | 483 | A Chain A, Lip5(mit)2 |
| PDB | 3rj0_A | 0.000000007 | 434 | 515 | 451 | 532 | A Chain A, Lip5(mit)2 |
| PDB | 3rj0_A | 0.0006 | 441 | 511 | 192 | 261 | A Chain A, Lip5(mit)2 |
