Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g06050.1 |
Family | CBM43 |
Protein Properties | Length: 494 Molecular Weight: 53157.3 Isoelectric Point: 4.9779 |
Chromosome | Chromosome/Scaffold: 1 Start: 4071018 End: 4073450 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 453 | 2.7e-23 |
WCVYNANAKDTSKLAENVNFACTFADCTALGFGSSCAGMDAIGNASYAFNMYFQVQNQKDEACDFQALAVPTQTDPSTDTCH | |||
GH17 | 30 | 349 | 0 |
LGMNWGTQATHPLSPKIVVQMLKDNGIKKVKLFDADQGTLGALAGTDIEVMVAIPNVLLDLMTDSDNARDWVRHNVSRYHFDGGVNIKYVAVGNEPFLAS YNGTFDKVTLPALKNIQNALNDAGLSDVKATVPLNADVYNSPKDKPVPSAGTFRPDITDLMTEMVDFLAKNGAPFTVNIYPYLSLYLSDDFPVNFAFFDG GADPVVDNGNSYTNVFDANFDTLVSALKAVGHGDLPIVIGEVGWPTDGDKHATYVYAQRFYTGLLKRLAANVGTPLRPNKYMEVYLFGLLDEDIKSVAPG AFERHWGVLRFDGQPKFPMD |
Full Sequence |
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Protein Sequence Length: 494 Download |
MAKDSALRGP WLCCVVAALA ASVSPAAEAL GMNWGTQATH PLSPKIVVQM LKDNGIKKVK 60 LFDADQGTLG ALAGTDIEVM VAIPNVLLDL MTDSDNARDW VRHNVSRYHF DGGVNIKYVA 120 VGNEPFLASY NGTFDKVTLP ALKNIQNALN DAGLSDVKAT VPLNADVYNS PKDKPVPSAG 180 TFRPDITDLM TEMVDFLAKN GAPFTVNIYP YLSLYLSDDF PVNFAFFDGG ADPVVDNGNS 240 YTNVFDANFD TLVSALKAVG HGDLPIVIGE VGWPTDGDKH ATYVYAQRFY TGLLKRLAAN 300 VGTPLRPNKY MEVYLFGLLD EDIKSVAPGA FERHWGVLRF DGQPKFPMDL TGQGQNTMLA 360 PAKDVQYLPK TWCVYNANAK DTSKLAENVN FACTFADCTA LGFGSSCAGM DAIGNASYAF 420 NMYFQVQNQK DEACDFQALA VPTQTDPSTD TCHFPIQIAA ASSTSSGHRR HSAGSLGAAA 480 LLVLALIQLF MLH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 217 | 341 | 126 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-15 | 371 | 441 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 371 | 454 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-70 | 31 | 349 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29689.1 | 0 | 27 | 468 | 18 | 464 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
RefSeq | NP_001051526.1 | 0 | 25 | 470 | 29 | 472 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130924.1 | 0 | 27 | 468 | 19 | 465 | hypothetical protein LOC100192029 [Zea mays] |
RefSeq | XP_002459388.1 | 0 | 12 | 469 | 19 | 472 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
RefSeq | XP_002463758.1 | 0 | 1 | 470 | 1 | 473 | hypothetical protein SORBIDRAFT_01g005610 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 28 | 351 | 1 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur8_A | 0 | 28 | 351 | 1 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur7_B | 0 | 28 | 351 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 28 | 351 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_D | 0 | 30 | 351 | 2 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |