y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g12810.1 |
Family | CBM43 |
Protein Properties | Length: 464 Molecular Weight: 47371.4 Isoelectric Point: 4.6227 |
Chromosome | Chromosome/Scaffold: 1 Start: 9689776 End: 9692896 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 457 | 4e-31 |
WCVASVAATDAQLQTDMDYACAQVGVDCGAIQPGGACFEPNTVRAHAAYAMNQLYHAAGAHPWNCDFRQSATLTSSNPSYGSC | |||
GH17 | 31 | 348 | 0 |
IGVNYGEVADNLPSPDETVKLLKSTTISKVRLYGVDAGVIRALAGTGISLVVGVANGDIPALAADPNAASGWLAANVLPFIPASTISVVAVGNEVLESGD ASLAAALLPALQNLRAAAVAAGDAAAGIKFSTVNTMAVLAQSDPPSTGAFRPEAAAQLQQILGFLSKTSAPFMINPYPYFAYQSDPRPDTLAFCLFQPNA GRVDGGSKIKYTNMFDAQVDAVKSALGRAGYGAVEIVVAETGWPTKGDPTEAGASVDNAKAYVANLVAHLRSGAGTPLMPGKAVDTYLFALYDEDLKPGP ASERSFGLYHTDLSMAYD |
Full Sequence |
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Protein Sequence Length: 464 Download |
MEAESRKPLL VVPILLCCFL GISGAAAQSY IGVNYGEVAD NLPSPDETVK LLKSTTISKV 60 RLYGVDAGVI RALAGTGISL VVGVANGDIP ALAADPNAAS GWLAANVLPF IPASTISVVA 120 VGNEVLESGD ASLAAALLPA LQNLRAAAVA AGDAAAGIKF STVNTMAVLA QSDPPSTGAF 180 RPEAAAQLQQ ILGFLSKTSA PFMINPYPYF AYQSDPRPDT LAFCLFQPNA GRVDGGSKIK 240 YTNMFDAQVD AVKSALGRAG YGAVEIVVAE TGWPTKGDPT EAGASVDNAK AYVANLVAHL 300 RSGAGTPLMP GKAVDTYLFA LYDEDLKPGP ASERSFGLYH TDLSMAYDAG LAASAASGSN 360 GNGQGAAVQP TKGGWCVASV AATDAQLQTD MDYACAQVGV DCGAIQPGGA CFEPNTVRAH 420 AAYAMNQLYH AAGAHPWNCD FRQSATLTSS NPSYGSCVFT GGQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-13 | 23 | 342 | 332 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-17 | 375 | 446 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-36 | 375 | 459 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-89 | 31 | 348 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91326.1 | 0 | 1 | 463 | 1 | 464 | hypothetical protein OsI_12942 [Oryza sativa Indica Group] |
RefSeq | NP_001050864.1 | 0 | 1 | 463 | 1 | 464 | Os03g0669300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148381.1 | 0 | 11 | 462 | 12 | 459 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466692.1 | 0 | 14 | 462 | 20 | 473 | hypothetical protein SORBIDRAFT_01g012380 [Sorghum bicolor] |
RefSeq | XP_002509479.1 | 0 | 25 | 462 | 22 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 31 | 351 | 3 | 314 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ur8_A | 0 | 31 | 351 | 3 | 314 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ur7_B | 0 | 31 | 351 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 31 | 351 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_D | 0 | 31 | 352 | 2 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |