| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g13232.1 |
| Family | CBM43 |
| Protein Properties | Length: 493 Molecular Weight: 51891.6 Isoelectric Point: 4.397 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10035222 End: 10037605 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 375 | 458 | 1.7e-25 |
| WCVLNANAPAESMSRLGDNVDYACSNADCTALSYGSTCGGLDAAGNASYAFNAYFQVQNQEVEACGFQGLAASTTQDPSTGTCN | |||
| GH17 | 30 | 352 | 0 |
| LGVNWGTMASHQLPPSSVVRMLQDNGIKKVKLFDADAGPLEALAGSGIEVMVAIPNIMLDMMTDYDTARDWVHKNVSAYNFDGGVNIKYVAVGNEPFLSS LNGTFLNVTFPALQNIQRALNEAGVGDTVKATVPLNADVYESPKDNPVPSAGRFRAEISGLMTEIVQFLNQSGAPFTVNIYPYLSLYGNAGFPLDFAFFD GTTSPVVDTNSGISYTNVFDANFDTLVSALNAAGVGGLPVMVGEVGWPTDGDKQATAAYAQRFYAGLLKKLASNAGTPLRANQYVEVYLFSLIDEDVKSV APGNFERHWGIMRYDGQPKYAMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MAGSRQLAVA ALLLVAAAGV CTRLPPAGAL GVNWGTMASH QLPPSSVVRM LQDNGIKKVK 60 LFDADAGPLE ALAGSGIEVM VAIPNIMLDM MTDYDTARDW VHKNVSAYNF DGGVNIKYVA 120 VGNEPFLSSL NGTFLNVTFP ALQNIQRALN EAGVGDTVKA TVPLNADVYE SPKDNPVPSA 180 GRFRAEISGL MTEIVQFLNQ SGAPFTVNIY PYLSLYGNAG FPLDFAFFDG TTSPVVDTNS 240 GISYTNVFDA NFDTLVSALN AAGVGGLPVM VGEVGWPTDG DKQATAAYAQ RFYAGLLKKL 300 ASNAGTPLRA NQYVEVYLFS LIDEDVKSVA PGNFERHWGI MRYDGQPKYA MDLTGQGRNT 360 ALVGARGVEY LPRAWCVLNA NAPAESMSRL GDNVDYACSN ADCTALSYGS TCGGLDAAGN 420 ASYAFNAYFQ VQNQEVEACG FQGLAASTTQ DPSTGTCNFS IQIETASSSS SAGPGRPLLV 480 SLVLAFVVVV TL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 224 | 344 | 125 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 7.0e-18 | 375 | 445 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-30 | 375 | 459 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-69 | 30 | 352 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT42176.1 | 0 | 33 | 476 | 37 | 472 | putative 3-glucanase [Zea mays] |
| RefSeq | NP_001050810.1 | 0 | 27 | 469 | 24 | 465 | Os03g0656800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147672.1 | 0 | 33 | 463 | 37 | 463 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002463758.1 | 0 | 13 | 469 | 14 | 470 | hypothetical protein SORBIDRAFT_01g005610 [Sorghum bicolor] |
| RefSeq | XP_002466725.1 | 0 | 35 | 463 | 36 | 463 | hypothetical protein SORBIDRAFT_01g012900 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 30 | 354 | 2 | 316 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3f55_C | 0 | 30 | 354 | 2 | 316 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3f55_B | 0 | 30 | 354 | 2 | 316 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3f55_A | 0 | 30 | 354 | 2 | 316 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3em5_D | 0 | 30 | 354 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
