Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g25517.1 |
Family | CBM43 |
Protein Properties | Length: 563 Molecular Weight: 59519.8 Isoelectric Point: 5.2699 |
Chromosome | Chromosome/Scaffold: 1 Start: 20739671 End: 20742093 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 388 | 464 | 6.5e-32 |
WCVARRDVSDARLQAALDYACNNGADCSAIQPGKVCYEPNTKLAHASYAFNDYYQSKGRASGTCDFSGAASIVYQQP | |||
CBM43 | 474 | 556 | 1.1e-33 |
WCVANAAVGDARLQAALDYACGKGRADCSAIQPGGRCFSPDTKVAHASYAFNDYYQRNGRSSKSCDFSGAGSVVYQQPKIGNC | |||
GH17 | 30 | 376 | 0 |
VGVSYGTNGDNLMDPSAVVDLLKKNGITMVRVYDTDSKVLTALKNTGIKTVVGIRNDMELAAAAGDPSWAVQWAKNNVLPYYPATDIRGVTVGNEVFKQV SQLNLQLVPAMKNVQAALVSLGLADAIKVTTPVAFDALKTSFPPSQGEFKDDIAQPVMSPMLDFLEQTGSYLMVNIYPYYTYTSQPGTIDLNYATFRPND GVVDPVTGLRYSSLFDAQLDAVYSAIDNVQQQVASSNGAVGTMLRGRRRHVPVVTGESGWCSYCPQSVGASMENAQAFNNNLAKRAHFGSASSSSSLAVV SDGTPARPDADISVYIFALFNENQKPADEQNFGLFYPSGKPVYQVDF |
Full Sequence |
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Protein Sequence Length: 563 Download |
MALTGSLIVL LGATLTLLYF LGAVAEAGEV GVSYGTNGDN LMDPSAVVDL LKKNGITMVR 60 VYDTDSKVLT ALKNTGIKTV VGIRNDMELA AAAGDPSWAV QWAKNNVLPY YPATDIRGVT 120 VGNEVFKQVS QLNLQLVPAM KNVQAALVSL GLADAIKVTT PVAFDALKTS FPPSQGEFKD 180 DIAQPVMSPM LDFLEQTGSY LMVNIYPYYT YTSQPGTIDL NYATFRPNDG VVDPVTGLRY 240 SSLFDAQLDA VYSAIDNVQQ QVASSNGAVG TMLRGRRRHV PVVTGESGWC SYCPQSVGAS 300 MENAQAFNNN LAKRAHFGSA SSSSSLAVVS DGTPARPDAD ISVYIFALFN ENQKPADEQN 360 FGLFYPSGKP VYQVDFSGGG GGGGTASWCV ARRDVSDARL QAALDYACNN GADCSAIQPG 420 KVCYEPNTKL AHASYAFNDY YQSKGRASGT CDFSGAASIV YQQPGICDPK AASWCVANAA 480 VGDARLQAAL DYACGKGRAD CSAIQPGGRC FSPDTKVAHA SYAFNDYYQR NGRSSKSCDF 540 SGAGSVVYQQ PKIGNCVLPS TG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-23 | 473 | 545 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 4.0e-24 | 387 | 458 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 387 | 467 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 1.0e-37 | 473 | 557 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-96 | 30 | 376 | 349 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04201.1 | 0 | 26 | 559 | 25 | 552 | hypothetical protein OsI_26344 [Oryza sativa Indica Group] |
GenBank | EAZ40149.1 | 0 | 26 | 559 | 25 | 552 | hypothetical protein OsJ_24593 [Oryza sativa Japonica Group] |
GenBank | EEC82195.1 | 0 | 1 | 559 | 1 | 547 | hypothetical protein OsI_26335 [Oryza sativa Indica Group] |
RefSeq | NP_001059878.1 | 0 | 1 | 559 | 1 | 547 | Os07g0538000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001059886.1 | 0 | 1 | 559 | 21 | 574 | Os07g0539400 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 30 | 376 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 30 | 376 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 30 | 376 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 29 | 377 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 29 | 377 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |