Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g26510.1 |
Family | CBM43 |
Protein Properties | Length: 539 Molecular Weight: 56743.2 Isoelectric Point: 5.8236 |
Chromosome | Chromosome/Scaffold: 1 Start: 21537370 End: 21542819 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 392 | 473 | 2e-32 |
CIASDDADEKAVQAAMDWACGPGRSDCTAIQPGEGCYQPNDVRSHASFAFDTYYQSQGKAGGSCYFQGAGMVTTTDPSHDSC | |||
GH17 | 46 | 373 | 0 |
VGVTIGTAVTNLLSPSDLAAFLRAQRITRVRLYDADPRLLSALASSGARAIVGVPNDELLALGSSPATASAWVSRRVLPFAGANSSSPGLISAIAVGDEV PTALPSALPVLLPAIQSLAAALAAANLSSIPVSTPLPFSIVLDPFPPSQAYFNQSLAKSFILPLLSHLANTSAPLMLNLYPYYSLMQSSGVVPVDNAMFK PLPPSLEMVDPNTLLHYTNVFDAMLDAVYVALKNLNVSAPVPVLVTETGWPSYGDRKEEPYASRDNANTYNSNLIKHVVTDKPGTPMRPGAQASVYIYEL FNEDLRPGPVSEANWGLFHGNGTPVYLL |
Full Sequence |
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Protein Sequence Length: 539 Download |
MGSRSRGGRS SSGLLLLSLH LLLGLHSSLR CFVSAAGGGG SGEPYVGVTI GTAVTNLLSP 60 SDLAAFLRAQ RITRVRLYDA DPRLLSALAS SGARAIVGVP NDELLALGSS PATASAWVSR 120 RVLPFAGANS SSPGLISAIA VGDEVPTALP SALPVLLPAI QSLAAALAAA NLSSIPVSTP 180 LPFSIVLDPF PPSQAYFNQS LAKSFILPLL SHLANTSAPL MLNLYPYYSL MQSSGVVPVD 240 NAMFKPLPPS LEMVDPNTLL HYTNVFDAML DAVYVALKNL NVSAPVPVLV TETGWPSYGD 300 RKEEPYASRD NANTYNSNLI KHVVTDKPGT PMRPGAQASV YIYELFNEDL RPGPVSEANW 360 GLFHGNGTPV YLLHASGADG FLGNATTDRT FCIASDDADE KAVQAAMDWA CGPGRSDCTA 420 IQPGEGCYQP NDVRSHASFA FDTYYQSQGK AGGSCYFQGA GMVTTTDPSH DSCIFPGSKL 480 YSNATKSDGA NTTSSQTSDA EGSAIWRLRT GRGEGFLLVF RFLLSVMVVI MTNSNLWT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 286 | 366 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-23 | 390 | 462 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 390 | 475 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-63 | 46 | 371 | 326 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83956.1 | 0 | 43 | 470 | 42 | 471 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC82125.1 | 0 | 43 | 538 | 40 | 538 | hypothetical protein OsI_26155 [Oryza sativa Indica Group] |
RefSeq | NP_001059752.1 | 0 | 43 | 538 | 42 | 540 | Os07g0510200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152289.1 | 0 | 32 | 538 | 37 | 544 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002518468.1 | 0 | 43 | 526 | 47 | 528 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 46 | 373 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 46 | 374 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 46 | 374 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 2.94273e-44 | 46 | 374 | 3 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 2.94273e-44 | 46 | 374 | 3 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |