| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g41907.2 |
| Family | CBM45 |
| Protein Properties | Length: 1456 Molecular Weight: 162600 Isoelectric Point: 5.5934 |
| Chromosome | Chromosome/Scaffold: 1 Start: 38621582 End: 38634352 |
| Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM45 | 109 | 184 | 1.8e-23 |
| LHWGALCPDKREWLLPSRRPDGTTVYKNQALRTPFIQSGDNSMLSIEIDDPAIQAIEFLVFDEAQNKWFKNNGQNF | |||
| CBM45 | 447 | 524 | 9.4e-25 |
| LHWALAKNGGEWEAPPSSIVPSGSTVLDKACETSFSKSELHGLQYQVVEIELDDRRYNGMPFVLRCGETWIKHNESDF | |||
| Full Sequence |
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| Protein Sequence Length: 1456 Download |
| MGGFSAAERC AVGIHASLSS PAARPRALKQ TAPVRRASHR ASTTLAVSGR RLLVPRAVAT 60 PTDRASPDIV GTFNLDSNSE LQVTLNPAPQ GAVAEINLKA TNTRGSLILH WGALCPDKRE 120 WLLPSRRPDG TTVYKNQALR TPFIQSGDNS MLSIEIDDPA IQAIEFLVFD EAQNKWFKNN 180 GQNFLIQLQT SHNQGQYASG ASASAATVPE DLVQVQSYLR WERNGKQSYT PEQEKLEYEA 240 ARAELIEELN RGVPLEKLRA RLTKSPNANE SDAPASQTTV AKVPEELVQV QAYIRWEKAG 300 KPNYSPEKQL VEFEEARKEL QAELDKGASI DQLRKKILKG NLEKKVSKQL ENKKYFSVER 360 IQRRNKDIMQ LLNKHKPVIT EEQVKAAPKQ PTVLDLFTKS LQEEDGFDVL SRKLFKFGDK 420 EILAIAANSL GKTKVHLATN HVEPLILHWA LAKNGGEWEA PPSSIVPSGS TVLDKACETS 480 FSKSELHGLQ YQVVEIELDD RRYNGMPFVL RCGETWIKHN ESDFYLDFNT KVTKKAKDTG 540 DAGKGTAKVL LERIADLEED AQRSFMHRFN IAADLVDQAR DAGLLGIVGL FVWIRFMSTR 600 QLIWNKNYNV KPREISKAQD RFTDDLENMY RSYPQYREIL RMILSAVGRG GEGDVGQRIR 660 DEILVIQRKN DCAGGMMEEW HQKLHNNTSP DDVVICQAII DYIKSDFDIS VYWDTLNKNG 720 ITKERLLSYD RAIRSEPKFR SDQKESLLSD LGNYMRSLKA VHSGADLESA IASCMGYKSE 780 GEGFMVGVQI NPVKGLSSRF PELLQFVLDH VEDKSAEPLL EGLLEARVEL RPLLIDSSER 840 LKDLIFLDIA LDSTFRTAVE RSYEELNNAA PEKIMYFIGL VLENLALSTD DNEDIIYCLK 900 GWNQALEMAK QKDDQWALYA KAFLDRTRLA LASKGEQYYN MMQPSAEYLG SLLNIDEWAV 960 NIFTEEIIRA GSAATLSALL NRFDPVLRNV AHLGSWQVIS PVEVTGYIVV VDELLSVQNK 1020 SYDKPTILVA KSVKGEEELP DGVIGVITPD MPDVLSHVSV RARNCKVLFA TCFDPNILSE 1080 LQGHEGKVLS FKTTSADITY REIAESELLQ SSSPNAQAGE AVPSLSLVKK KFLGKYAISA 1140 EEFSEEMVGA KSRNIAYLKG KVPSWVGVPT SVAIPFGTFE KVLSDIMNKE VAQNIQLLKA 1200 RLVQDELSVL REMRKTVLDL TAPAEFVKNL KDKMVASGMP WPGDESEQRW EQAWMAIKKV 1260 WASKWNERAY FSTRKVKLDH DYLSMAVLVQ EIVKADYAFV IHTTNPSSGD SSEIYAEVVK 1320 GLGETLVGAY PGRAMSFVCK KDDLNSPKVL GYPSKPIGLF IKRSSIIFRS DSNGEDLEGY 1380 AGAGLYDSVP MDEEDEVVLD YTTDPLITDP GFRNSILSSI ARAGHAIEEL YGSPQDVEGA 1440 VKDGKIYVVQ TRPQM* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0574 | PpsA | 1.0e-10 | 1249 | 1453 | 207 | + Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] | ||
| PRK06464 | PRK06464 | 3.0e-14 | 1256 | 1453 | 211 | + phosphoenolpyruvate synthase; Validated | ||
| PRK06241 | PRK06241 | 2.0e-15 | 1256 | 1453 | 200 | + phosphoenolpyruvate synthase; Validated | ||
| TIGR01418 | PEP_synth | 1.0e-16 | 1256 | 1454 | 206 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
| pfam01326 | PPDK_N | 6.0e-34 | 1144 | 1454 | 340 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005524 | ATP binding |
| GO:0016301 | kinase activity |
| GO:0016310 | phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC80673.1 | 0 | 1 | 1455 | 1 | 1460 | hypothetical protein OsI_23085 [Oryza sativa Indica Group] |
| GenBank | EEE65768.1 | 0 | 41 | 1455 | 82 | 1496 | hypothetical protein OsJ_21446 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057699.1 | 0 | 41 | 1455 | 3 | 1414 | Os06g0498400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002315679.1 | 0 | 43 | 1455 | 63 | 1477 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438419.1 | 0 | 8 | 1455 | 15 | 1469 | hypothetical protein SORBIDRAFT_10g017820 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2ols_A | 0.0002 | 1256 | 1454 | 157 | 336 | A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777523 | 899 | 558 | 1456 | 0 |
| HO794398 | 753 | 704 | 1456 | 0 |
| HO794398 | 142 | 563 | 704 | 0 |
| DV483250 | 281 | 881 | 1161 | 0 |
| ES295199 | 298 | 815 | 1112 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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