Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g69610.1 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 52958 Isoelectric Point: 5.8384 |
Chromosome | Chromosome/Scaffold: 1 Start: 68112206 End: 68115770 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 364 | 445 | 1.5e-30 |
CVARDGADEKMLQAALDWACGPGKVDCSVLTQGHACYEPDTVQDHATYAFNAYYHGIGMGSGSCYFSGVAVVTTTDPSHGSC | |||
GH17 | 25 | 345 | 0 |
IGVNIGTAMSSVPAPTQITTLLRSQNIRHIRLYDADPAMLSALANTGIRVIVSVPNEQLLGIGNSNATAAKWVARNVAAHYPSVNITAIAVGSEVLSTLP NAAPLIMPAVRFLQNALVAASLDRFIKVSTPHSSSIILDSFPPSQAFFNRSLDPVLVPLLKFLQSTGAPLMLNVYPYYDYMRSNGVIPLDYALFRTLPPN KEAVDANTLLHYTNVFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKGDASSEPDANADNADTYNSNLIRHVMNVTGTPKHPGVAVPTYIYELYDEDTRP GTTSEKYWGLFDMNGSPAYAL |
Full Sequence |
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Protein Sequence Length: 499 Download |
MKKLSFFLSL LAAVAVVHGE DGAYIGVNIG TAMSSVPAPT QITTLLRSQN IRHIRLYDAD 60 PAMLSALANT GIRVIVSVPN EQLLGIGNSN ATAAKWVARN VAAHYPSVNI TAIAVGSEVL 120 STLPNAAPLI MPAVRFLQNA LVAASLDRFI KVSTPHSSSI ILDSFPPSQA FFNRSLDPVL 180 VPLLKFLQST GAPLMLNVYP YYDYMRSNGV IPLDYALFRT LPPNKEAVDA NTLLHYTNVF 240 DAVVDAAYFA MAYLNVTNVP VMVTETGWPH KGDASSEPDA NADNADTYNS NLIRHVMNVT 300 GTPKHPGVAV PTYIYELYDE DTRPGTTSEK YWGLFDMNGS PAYALHLTGS GQLLANDTTN 360 NTFCVARDGA DEKMLQAALD WACGPGKVDC SVLTQGHACY EPDTVQDHAT YAFNAYYHGI 420 GMGSGSCYFS GVAVVTTTDP SHGSCVYGGK NGSALLNGTS MAPSSNSTAD AGSHRAVGDV 480 SSFLRSVAAA LLLSVVLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 257 | 335 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-18 | 362 | 434 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 362 | 447 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-81 | 25 | 345 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN30650.1 | 0 | 1 | 487 | 1 | 489 | unknown [Zea mays] |
RefSeq | NP_001049413.1 | 0 | 11 | 485 | 12 | 490 | Os03g0221500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130376.1 | 0 | 1 | 490 | 1 | 492 | hypothetical protein LOC100191471 [Zea mays] |
RefSeq | NP_001150141.1 | 0 | 18 | 487 | 19 | 489 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002468258.1 | 0 | 1 | 490 | 1 | 492 | hypothetical protein SORBIDRAFT_01g042560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 25 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 25 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 25 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 25 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |