| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g18700.1 |
| Family | CBM43 |
| Protein Properties | Length: 488 Molecular Weight: 53390.3 Isoelectric Point: 8.6912 |
| Chromosome | Chromosome/Scaffold: 2 Start: 16586690 End: 16589799 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 373 | 454 | 7.9e-23 |
| WCVFNKDAKDKYRDLPASVNYACSNADCTPLGYGSSCNGLSHDGNISYAFNIYFQTMDQDVRACSFGGLAKIVTTNASQGGC | |||
| GH17 | 33 | 350 | 0 |
| VGVNWGTMMSHPMHPAAVVRMLAANGVDRVKMFDADPWTVSALAGSGVQAMLAVPNDHLASVARDRRRARDWVRDNVTRNLHDGVDIRYVAVGNEPFLKS YNGSFINITFPALKNIQRALDEAGLLVKAVVPLNADVYNSPENNPVPSAGNFRRDINALMVDIVNFLHRNDAPFVVNIYPYLSLYQNANFPLNFSFFDGG SKPVYDKGMVYTNVFDANFDTLVWSLRKAGVPDMKIIVGEIGWPTDGDKNANVKYAQKFYDGFLKKISKNVGTPLRPGRMEAYLFALIDENQKSVLPGRF ERHWGLFTYDGKPKFSMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MAWLHAAAAA MVVAALIVAV AVVIPRPAAA SGVGVNWGTM MSHPMHPAAV VRMLAANGVD 60 RVKMFDADPW TVSALAGSGV QAMLAVPNDH LASVARDRRR ARDWVRDNVT RNLHDGVDIR 120 YVAVGNEPFL KSYNGSFINI TFPALKNIQR ALDEAGLLVK AVVPLNADVY NSPENNPVPS 180 AGNFRRDINA LMVDIVNFLH RNDAPFVVNI YPYLSLYQNA NFPLNFSFFD GGSKPVYDKG 240 MVYTNVFDAN FDTLVWSLRK AGVPDMKIIV GEIGWPTDGD KNANVKYAQK FYDGFLKKIS 300 KNVGTPLRPG RMEAYLFALI DENQKSVLPG RFERHWGLFT YDGKPKFSMD LSGNGQNKFL 360 FGVEGVQYLP SQWCVFNKDA KDKYRDLPAS VNYACSNADC TPLGYGSSCN GLSHDGNISY 420 AFNIYFQTMD QDVRACSFGG LAKIVTTNAS QGGCVFPVQI LSASERMVPL RLLAVSLVLS 480 VAVFVLI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-15 | 372 | 442 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-29 | 372 | 456 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-64 | 33 | 350 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79587.1 | 0 | 31 | 432 | 31 | 432 | hypothetical protein OsI_20766 [Oryza sativa Indica Group] |
| GenBank | EEE64491.1 | 0 | 31 | 487 | 31 | 487 | hypothetical protein OsJ_19341 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056153.1 | 0 | 31 | 487 | 31 | 487 | Os05g0535100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152213.1 | 0 | 36 | 462 | 33 | 460 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002440138.1 | 0 | 36 | 464 | 34 | 463 | hypothetical protein SORBIDRAFT_09g026690 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 33 | 354 | 3 | 317 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3ur8_A | 0 | 33 | 354 | 3 | 317 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3ur7_B | 0 | 33 | 354 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 33 | 354 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 33 | 354 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
