| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g03520.1 |
| Family | CBM43 |
| Protein Properties | Length: 491 Molecular Weight: 53199.3 Isoelectric Point: 5.9238 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2285803 End: 2290966 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 7.8e-25 |
| WCVLKPSANLNDAKLPDTVSYACSMADCTSLGYGTSCGGLDTRSNISYAYNSFFQKNDQDDVACGFSGFATITGQNPSTGTC | |||
| GH17 | 32 | 349 | 0 |
| IGANWGTQASHPLPPDTVVKMLKGNGFQKVKLFDAEDGTMSALRKSGLEVMVGIPNDLLTTMATSMKAAEKWVDKNVSNYLNDGCNIRYVAVGNEPFLST YNGSFLQSTFPALRNIQSALVKAGLSNQIKVTVPQNADVYQTSTSKPSDGDFRTDIHDRMLEIVKFLSDNGGAFTVNIYPFISLYIEPNFPKDYAFFEGA ASPIVDGSATYTNMFDANHDTLIWALKKNGYGNLPIIIGEIGWPTDGDVNANAQFARLFNQGFMTHIATGRGTPMRPGPIDAYLFSLIDEDEKSIQPGNF ERHWGIFTYDGLPKYELT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MGSWSGHGGG AAAVVLVVAV LVTWAAAGVG AIGANWGTQA SHPLPPDTVV KMLKGNGFQK 60 VKLFDAEDGT MSALRKSGLE VMVGIPNDLL TTMATSMKAA EKWVDKNVSN YLNDGCNIRY 120 VAVGNEPFLS TYNGSFLQST FPALRNIQSA LVKAGLSNQI KVTVPQNADV YQTSTSKPSD 180 GDFRTDIHDR MLEIVKFLSD NGGAFTVNIY PFISLYIEPN FPKDYAFFEG AASPIVDGSA 240 TYTNMFDANH DTLIWALKKN GYGNLPIIIG EIGWPTDGDV NANAQFARLF NQGFMTHIAT 300 GRGTPMRPGP IDAYLFSLID EDEKSIQPGN FERHWGIFTY DGLPKYELTL GTANSQLQRA 360 SGVKYLEKKW CVLKPSANLN DAKLPDTVSY ACSMADCTSL GYGTSCGGLD TRSNISYAYN 420 SFFQKNDQDD VACGFSGFAT ITGQNPSTGT CRFGIMIEVD SAFSWKPQRV KNNYLLMLLL 480 VIVHLCLSFS * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 263 | 341 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-15 | 369 | 440 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-29 | 369 | 453 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-76 | 32 | 349 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY84415.1 | 0 | 31 | 473 | 34 | 475 | hypothetical protein OsI_05789 [Oryza sativa Indica Group] |
| RefSeq | NP_001045844.1 | 0 | 3 | 473 | 4 | 472 | Os02g0139300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151032.1 | 0 | 35 | 468 | 36 | 471 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
| RefSeq | XP_002331390.1 | 0 | 27 | 458 | 9 | 443 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530371.1 | 0 | 18 | 458 | 6 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 32 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 32 | 338 | 1 | 294 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 32 | 338 | 1 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 32 | 338 | 1 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 32 | 350 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
